Interleukin-1 Beta rs16944 and rs1143634 and Interleukin-6 Receptor rs12083537 Single Nucleotide Polymorphisms as Potential Predictors of COVID-19 Severity

被引:0
|
作者
Ahmed, Inas A. [1 ,2 ,3 ]
Kharboush, Taghrid G. [4 ]
Al-Amodi, Hiba S. [5 ]
Kamel, Hala F. M. [5 ,6 ]
Darwish, Ehab [7 ,8 ]
Mosbeh, Asmaa [9 ]
Galbt, Hossam A. [10 ]
Abdel-Kareim, Amal M. [11 ]
Abdelsattar, Shimaa [12 ]
机构
[1] Benha Univ, Fac Med, Dept Med Biochem & Mol Biol, Banha 13518, Egypt
[2] Benha Univ, Fac Med, Cent Lab Res, Banha 13518, Egypt
[3] Benha Natl Univ, Fac Med, Dept Med Biochem & Mol Biol, El Obour 11828, Egypt
[4] Benha Univ, Fac Med, Dept Med Microbiol & Immunol, Banha 13518, Egypt
[5] Umm Al Qura Univ, Fac Med, Dept Biochem, POB 715, Mecca 21955, Saudi Arabia
[6] Ain Shams Univ, Fac Med, Dept Med Biochem & Mol Biol, Cairo 11566, Egypt
[7] Zagazig Univ, Fac Med, Dept Trop Med, Zagazig 44511, Egypt
[8] King Faisal Univ, Coll Med, internal Med Dept, Alahsa 31982, Saudi Arabia
[9] Menoufia Univ, Natl Liver Inst, Dept Pathol, Menoufia 32511, Egypt
[10] Menoufia Univ, Natl Liver Inst, Dept Clin Pathol, Menoufia, Egypt
[11] Benha Univ, Fac Sci, Dept Zool, Banha 13518, Egypt
[12] Menoufia Univ, Clin Biochem & Mol Diagnost Dept, Natl Liver Inst, Menoufia 32511, Egypt
来源
PATHOGENS | 2024年 / 13卷 / 10期
关键词
COVID-19; SNPs; interleukin-6; receptor; interleukin-1; beta; genotype; GENE; PROTEIN; IL-1B; RISK;
D O I
10.3390/pathogens13100915
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Host genetic variation has been recognized as a key predictor of diverse clinical sequelae among severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-infected patients. Insights into the link between the Interleukin-6 receptor (IL-6R) and Interleukin-1 beta (IL-1 beta) genetic variation and severe coronavirus disease 2019 (COVID-19) are crucial for developing new predictors and therapeutic targets. We aimed to investigate the association of IL-6R rs12083537, IL-1 beta rs16944, and IL-1 beta rs1143634 SNPs with the severity of COVID-19. Our study was conducted on 300 COVID-19-negative individuals (control group) and 299 COVID-19-positive cases, classified into mild, moderate, and severe subgroups. Analyses of IL-1 beta (rs16944, rs1143634) and IL-6R (rs12083537) SNPs' genotypes were performed using qPCR genotyping assays. The IL-1 beta (rs16944) CC genotype and IL-6R (rs12083537) GG genotype were substantially related to COVID-19 severity, which was also associated with comorbidities and some laboratory parameters (p < 0.001). The IL-1 beta (rs1143634) TT genotype was found to be protective. Likewise, the IL-1 beta (rs16944) CC genotype was associated with increased mortality. IL-1 beta rs16944 and IL-6R rs12083537 SNPs are promising potential predictors of SARS-CoV-2 disease severity. Meanwhile, the rs1143634 SNP T allele was protective against severity and mortality risk.
引用
收藏
页数:17
相关论文
共 21 条
  • [1] Interleukin-6-receptor polymorphisms rs12083537, rs2228145, and rs4329505 as predictors of response to tocilizumab in rheumatoid arthritis
    Enevold, Christian
    Baslund, Bo
    Linde, Louise
    Josephsen, Norah L.
    Tarp, Ulrik
    Lindegaard, Hanne
    Jacobsen, Soren
    Nielsen, Claus H.
    PHARMACOGENETICS AND GENOMICS, 2014, 24 (08): : 401 - 405
  • [2] Genetic polymorphisms in interleukin-1β (rs1143634) and interleukin-8 (rs4073) are associated with survival after resection of intrahepatic cholangiocarcinoma
    Lurje, Isabella
    Gaisa, Nadine Therese
    Dahl, Edgar
    Knuechel, Ruth
    Strnad, Pavel
    Trautwein, Christian
    Tacke, Frank
    Neumann, Ulf Peter
    Czigany, Zoltan
    Lurje, Georg
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [3] Implication of single nucleotide polymorphisms in Interleukin-10 gene (rs1800896 and rs1800872) with severity of COVID-19
    Saliha Rizvi
    S. Mohd.Shiraz Rizvi
    Syed Tasleem Raza
    Mohd. Abbas
    Kaynat Fatima
    Zeashan H. Zaidi
    Farzana Mahdi
    Egyptian Journal of Medical Human Genetics, 23
  • [4] Implication of single nucleotide polymorphisms in Interleukin-10 gene (rs1800896 and rs1800872) with severity of COVID-19
    Rizvi, Saliha
    Rizvi, S. Mohd. Shiraz
    Raza, Syed Tasleem
    Abbas, Mohd.
    Fatima, Kaynat
    Zaidi, Zeashan H.
    Mahdi, Farzana
    EGYPTIAN JOURNAL OF MEDICAL HUMAN GENETICS, 2022, 23 (01)
  • [5] Association of Interleukin-6 (rs1800795) and Interleukin-10 (rs1800896) Genetic Polymorphisms with the Outcome of COVID-19 Infection: A Single Center Study
    El-Bendary, Mahmoud
    Naemattalah, Mustafa
    Elalfy, Hatem
    Elhawary, Ahmed
    El-Gilany, Abdel-Hady
    Zaghloul, Hosam
    Anber, Sara
    Elegezy, Mohamed
    VIRAL IMMUNOLOGY, 2024, 37 (05) : 251 - 258
  • [6] Association of genetic variants of interleukin-1β gene -511T/C (rs16944) and +3954C/T (rs1143634) and serum levels of pentaxin (PTX3) and interleukin -1β (IL-1β) with disease activity of systemic lupus erythematosus patients
    Behiry, Eman G.
    Kamal, Howyda M.
    Rahman, Anas A.
    Eissa, Hesham A.
    Hassan, Waleed A.
    Hassan, Zainab G.
    Shafeek, Marian M.
    El-Fallah, Asmaa A.
    GENE REPORTS, 2020, 21
  • [7] Association of the C3953T (rs1143634) variant of the interleukin 1 beta gene with the features of a complicated course of COVID-19-associated pneumonia
    Pokhylko, Valeriy
    Cherniavska, Yuliia
    Fishchuk, Liliia
    Rossokha, Zoia
    Popova, Olena
    Vershyhora, Viktoriia
    Ievseienkova, Olena
    Soloviova, Halyna
    Zhuk, Liudmyla
    Gorovenko, Nataliia
    MOLECULAR BIOLOGY REPORTS, 2024, 51 (01)
  • [8] Interleukin-1 Beta Gene Polymorphism rs16944 May Associate with Increased Susceptibility to Extremity Chronic Osteomyelitis in Chinese Han Population
    Yao, Zi-long
    Lin, Qing-rong
    Hu, Yan-jun
    Hou, Yi-long
    Ma, Yun-fei
    Yu, Bin
    Jiang, Nan
    BIOMED RESEARCH INTERNATIONAL, 2019, 2019
  • [9] Interleukin-6 and rs1800796 locus single nucleotide polymorphisms in response to hypoxia/reoxygenation in hepatocytes
    Wang, Zhaowen
    Wu, Shaohan
    Liao, Jianhua
    Zhong, Lin
    Xing, Tonghai
    Fan, Junwei
    Peng, Zhihai
    INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE, 2016, 38 (01) : 192 - 200
  • [10] Single nucleotide polymorphisms in IL-1A RS1800587, IL-1B RS1143634 and vitamin D receptor rs731236 in stage III grade B/C periodontitis
    Ozener, H. Ozturk
    Aslan, B. Tacal
    Eken, B. F.
    Agrali, O. B.
    Yildrim, H. S.
    Altunok, E. C.
    Ulucan, K.
    Kuru, L.
    BALKAN JOURNAL OF MEDICAL GENETICS, 2022, 25 (01) : 51 - 60