Complete genome sequence of Pseudoxanthomonas koreensis strain TDY-1, an odor-reducing bacterium isolated from livestock wastewater

被引：0

作者：

Han, Kook-Il ^{[1
]}

Nam, Young Ho ^{[1
]}

Kim, Eui-Jin ^{[1
]}

机构：

[1] Nakdonggang Natl Inst Biol Resources NNIBR, Using Technol Dev Dept, Sangju, South Korea

来源：

MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2025年 / 14卷 / 02期

关键词：

Pseudoxanthomonas koreensis TDY-1;

D O I：

10.1128/mra.01027-24

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

We report the complete genome sequence of Pseudoxanthomonas koreensis TDY-1, an odor-reducing strain isolated from livestock wastewater on a pig farm. Its genome consists of a 2.97-Mb chromosome.

引用

页数：3

共 9 条

[1] Biological methods for odor treatment - A review [J].

Barbusinski, Krzysztof ;

Kalemba, Katarzyna ;

Kasperczyk, Damian ;

Urbaniec, Krzysztof ;

Kozik, Violetta .

JOURNAL OF CLEANER PRODUCTION, 2017, 152 :223-241

[2]

Besemer J, 2001, Nucleic Acids Res, V29, P2607

[3] Trimmomatic: a flexible trimmer for Illumina sequence data [J].

Bolger, Anthony M. ;

Lohse, Marc ;

Usadel, Bjoern .

BIOINFORMATICS, 2014, 30 (15) :2114-2120

[4]

Chin CS, 2013, NAT METHODS, V10, P563, DOI [10.1038/nmeth.2474, 10.1038/NMETH.2474]

[5] Circos: An information aesthetic for comparative genomics [J].

Krzywinski, Martin ;

Schein, Jacqueline ;

Birol, Inanc ;

Connors, Joseph ;

Gascoyne, Randy ;

Horsman, Doug ;

Jones, Steven J. ;

Marra, Marco A. .

GENOME RESEARCH, 2009, 19 (09) :1639-1645

[6] BUSCO: Assessing Genomic Data Quality and Beyond [J].

Manni, Mose ;

Berkeley, Matthew R. ;

Seppey, Mathieu ;

Zdobnov, Evgeny M. .

CURRENT PROTOCOLS, 2021, 1 (12)

[7] Prokka: rapid prokaryotic genome annotation [J].

Seemann, Torsten .

BIOINFORMATICS, 2014, 30 (14) :2068-2069

[8] Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement [J].

Walker, Bruce J. ;

Abeel, Thomas ;

Shea, Terrance ;

Priest, Margaret ;

Abouelliel, Amr ;

Sakthikumar, Sharadha ;

Cuomo, Christina A. ;

Zeng, Qiandong ;

Wortman, Jennifer ;

Young, Sarah K. ;

Earl, Ashlee M. .

PLOS ONE, 2014, 9 (11)

[9] Emissions, measurement, and control of odor in livestock farms: A review [J].

Wang, Yong-Chao ;

Han, Meng-Fei ;

Jia, Ti-Pei ;

Hu, Xu-Rui ;

Zhu, Huai-Qun ;

Tong, Zhen ;

Lin, Yu-Ting ;

Wang, Can ;

Liu, De-Zhao ;

Peng, Yong-Zhen ;

Wang, Gen ;

Meng, Jie ;

Zhai, Zeng-Xiu ;

Zhang, Yan ;

Deng, Ji-Guang ;

Hsi, Hsing-Cheng .

SCIENCE OF THE TOTAL ENVIRONMENT, 2021, 776 (776)

← 1 →