A reference dataset of O-GlcNAc proteins in quadriceps skeletal muscle from mice

被引:0
作者
Jaiswal, Ruchi [1 ]
Liu, Yimin [2 ]
Petriello, Michael [3 ,4 ]
Zhang, Xiangmin [1 ]
Yi, Zhengping [1 ]
Fehl, Charlie [2 ]
机构
[1] Wayne State Univ, Eugene Applebaum Coll Pharm, Dept Pharmaceut Sci, 259 Mack Ave, Detroit, MI 48201 USA
[2] Wayne State Univ, Dept Chem, 5101 Cass Ave, Detroit, MI 48202 USA
[3] Wayne State Univ, Inst Environm Hlth Sci, 6135 Woodward Ave, Detroit, MI 48202 USA
[4] Wayne State Univ, Dept Pharmacol, 6135 Woodward Ave, Detroit, MI 48202 USA
关键词
glycoproteomics; mouse quadriceps; O-GlcNAc; skeletal muscle; tissue atlas; N-ACETYLGLUCOSAMINE; INSULIN-RESISTANCE; PHOSPHORYLATION; GLCNACYLATION; GLUCOSE; IDENTIFICATION; RAT; QUANTIFICATION; TRANSFERASE; CYTOSCAPE;
D O I
10.1093/glycob/cwaf005
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A key nutrient sensing process in all animal tissues is the dynamic attachment of O-linked N-acetylglucosamine (O-GlcNAc). Determining the targets and roles of O-GlcNAc glycoproteins has the potential to reveal insights into healthy and diseased metabolic states. In cell studies, thousands of proteins are known to be O-GlcNAcylated, but reference datasets for most tissue types in animals are lacking. Here, we apply a chemoenzymatic labeling study to compile a high coverage dataset of quadriceps skeletal muscle O-GlcNAc glycoproteins from mice. Our dataset contains over 550 proteins, and > 80% of the dataset matched known O-GlcNAc proteins. This dataset was further annotated via bioinformatics, revealing the distribution, protein interactions, and gene ontology (GO) functions of these skeletal muscle proteins. We compared these quadriceps glycoproteins with a high-coverage O-GlcNAc enrichment profile from mouse hearts and describe the key overlap and differences between these tissue types. Quadriceps muscles can be used for biopsies, so we envision this dataset to have potential biomedical relevance in detecting aberrant glycoproteins in metabolic diseases and physiological studies. This new knowledge adds to the growing collection of tissues with high-coverage O-GlcNAc profiles, which we anticipate will further the systems biology of O-GlcNAc mechanisms, functions, and roles in disease.
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页数:12
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