A novel method for inferring B cell clonal lineages from single-cell RNA sequencing data

被引：0
|
作者：
Weber, Leah [1 ]
Reiman, Derek
Roddur, Mrinmoy [2 ]
Qi, Yuanyuan [2 ]
El-Kebir, Mohammed [2 ]
Khan, Aly [3 ]
机构：
[1] Toyota Technol Inst, Chicago, IL USA
[2] Univ Illinois, Champaign, IL USA
[3] Univ Chicago, Chicago, IL USA
来源：
JOURNAL OF IMMUNOLOGY | 2024年 / 212卷 / 01期
关键词：
D O I：
10.4049/jimmunol.212.supp.1190.5501
中图分类号：
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号：
100102 ;
摘要：
引用
收藏
页数：2
相关论文
共 50 条
  • [1] Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data
    Jong Kyoung Kim
    John C Marioni
    Genome Biology, 14
  • [2] Inferring population dynamics from single-cell RNA-sequencing time series data
    Fischer, David S.
    Fiedler, Anna K.
    Kernfeld, Eric M.
    Genga, Ryan M. J.
    Bastidas-Ponce, Aimee
    Bakhti, Mostafa
    Lickert, Heiko
    Hasenauer, Jan
    Maehr, Rene
    Theis, Fabian J.
    NATURE BIOTECHNOLOGY, 2019, 37 (04) : 461 - +
  • [3] Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data
    Kim, Jong Kyoung
    Marioni, John C.
    GENOME BIOLOGY, 2013, 14 (01): : 1 - 12
  • [4] Inferring population dynamics from single-cell RNA-sequencing time series data
    David S. Fischer
    Anna K. Fiedler
    Eric M. Kernfeld
    Ryan M. J. Genga
    Aimée Bastidas-Ponce
    Mostafa Bakhti
    Heiko Lickert
    Jan Hasenauer
    Rene Maehr
    Fabian J. Theis
    Nature Biotechnology, 2019, 37 : 461 - 468
  • [5] OncoNEM: inferring tumor evolution from single-cell sequencing data
    Ross, Edith M.
    Markowetz, Florian
    GENOME BIOLOGY, 2016, 17
  • [6] OncoNEM: inferring tumor evolution from single-cell sequencing data
    Edith M. Ross
    Florian Markowetz
    Genome Biology, 17
  • [7] Evaluation of single-cell classifiers for single-cell RNA sequencing data sets
    Zhao, Xinlei
    Wu, Shuang
    Fang, Nan
    Sun, Xiao
    Fan, Jue
    BRIEFINGS IN BIOINFORMATICS, 2020, 21 (05) : 1581 - 1595
  • [8] SNV identification from single-cell RNA sequencing data
    Schnepp, Patricia M.
    Chen, Mengjie
    Keller, Evan T.
    Zhou, Xiang
    HUMAN MOLECULAR GENETICS, 2019, 28 (21) : 3569 - 3583
  • [9] PanoView: An iterative clustering method for single-cell RNA sequencing data
    Hu, Ming-Wen
    Kim, Dong Won
    Liu, Sheng
    Zack, Donald J.
    Blackshaw, Seth
    Qian, Jiang
    PLOS COMPUTATIONAL BIOLOGY, 2019, 15 (08)
  • [10] A Bayesian factorization method to recover single-cell RNA sequencing data
    Wen, Zi-Hang
    Langsam, Jeremy L.
    Zhang, Lu
    Shen, Wenjun
    Zhou, Xin
    CELL REPORTS METHODS, 2022, 2 (01):
12345