Genetic insights into the connection between pulmonary TB and non-communicable diseases: An integrated analysis of shared genes and potential treatment targets

被引:0
作者
Mahjabeen, Amira [1 ]
Hasan, Md. Zahid [1 ]
Rahman, Md. Tanvir [2 ]
Islam, Md. Aminul [1 ]
Khan, Risala Tasin [3 ]
Kaiser, M. Shamim [3 ]
机构
[1] Daffodil Int Univ, Dept Comp Sci & Engn, Hlth Informat Res Lab, Dhaka, Bangladesh
[2] Mawlana Bhashani Sci & Technol Univ, Dept Informat & Commun Technol, Tangail, Bangladesh
[3] Jahangirnagar Univ, Inst Informat Technol, Dhaka, Bangladesh
关键词
CHRONIC KIDNEY-DISEASE; LUNG-CANCER; TUBERCULOSIS; MORTALITY; RISK; INFLAMMATION; EXPRESSION; TISSUE;
D O I
10.1371/journal.pone.0312072
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background Pulmonary Tuberculosis (PTB) is a significant global health issue due to its high incidence, drug resistance, contagious nature, and impact on people with compromised immune systems. As mentioned by the World Health Organization (WHO), TB is responsible for more global fatalities than any other infectious illness. On the other side, WHO also claims that noncommunicable diseases (NCDs) kill 41 million people yearly worldwide. In this regard, several studies suggest that PTB and NCDs are linked in various ways and that people with PTB are more likely to acquire NCDs. At the same time, NCDs can increase susceptibility to active TB infection. Furthermore, because of potential drug interactions and therapeutic challenges, treating individuals with both PTB and NCDs can be difficult. This study focuses on seven NCDs (lung cancer (LC), diabetes mellitus (DM), Parkinson's disease (PD), silicosis (SI), chronic kidney disease (CKD), cardiovascular disease (CVD), and rheumatoid arthritis (RA)) and rigorously presents the genetic relationship with PTB regarding shared genes and outlines possible treatment plans.Objectives BlueThis study aims to identify the drug components that can regulate abnormal gene expression in NCDs. The study will reveal hub genes, potential biomarkers, and drug components associated with hub genes through statistical measures. This will contribute to targeted therapeutic interventions.Methods Numerous investigations, including protein-protein interaction (PPI), gene regulatory network (GRN), enrichment analysis, physical interaction, and protein-chemical interaction, have been carried out to demonstrate the genetic correlation between PTB and NCDs. During the study, nine shared genes such as TNF, IL10, NLRP3, IL18, IFNG, HMGB1, CXCL8, IL17A, and NFKB1 were discovered between TB and the above-mentioned NCDs, and five hub genes (NFKB1, TNF, CXCL8, NLRP3, and IL10) were selected based on degree values.Results and conclusion In this study, we found that all of the hub genes are linked with the 10 drug components, and it was observed that aspirin CTD 00005447 was mostly associated with all the other hub genes. This bio-informatics study may help researchers better understand the cause of PTB and its relationship with NCDs, and eventually, this can lead to exploring effective treatment plans.
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页数:30
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共 117 条
[1]   Cancer in rheumatoid arthritis:: Occurrence, mortality, and associated factors in a South European population [J].
Abasolo, Lydia ;
Judez, Enrique ;
Descalzo, Miguel Angel ;
Gonzalez-Alvaro, Isidoro ;
Jover, Juan Angel ;
Carmona, Loreto .
SEMINARS IN ARTHRITIS AND RHEUMATISM, 2008, 37 (06) :388-397
[2]   Differential MicroRNAs Expression in Serum of Patients with Lung Cancer, Pulmonary Tuberculosis, and Pneumonia [J].
Abd-El-Fattah, Amal A. ;
Sadik, Nermin Abdel Hamid ;
Shaker, Olfat Gamil ;
Aboulftouh, Mariam Lotfy .
CELL BIOCHEMISTRY AND BIOPHYSICS, 2013, 67 (03) :875-884
[3]   Non-communicable disease co-morbidity and associated factors in tuberculosis patients: A cross-sectional study in Gabon [J].
Adegbite, B. R. ;
Edoa, J. R. ;
Abdul, J. B. P. Agbo Achimi ;
Epola, M. ;
Mevyann, C. ;
Dejon-Agobe, J. C. ;
Zinsou, J. F. ;
Honkpehedji, Y. J. ;
Mpagama, S. G. ;
Alabi, A. S. ;
Kremsner, P. G. ;
Klipstein-Grobusch, K. ;
Adegnika, A. A. ;
Grobusch, M. P. .
ECLINICALMEDICINE, 2022, 45
[4]   An Integrative Network Approach to Identify Common Genes for the Therapeutics in Tuberculosis and Its Overlapping Non-Communicable Diseases [J].
Alam, Aftab ;
Abubaker Bagabir, Hala ;
Sultan, Armiya ;
Siddiqui, Mohd Faizan ;
Imam, Nikhat ;
Alkhanani, Mustfa F. ;
Alsulimani, Ahmad ;
Haque, Shafiul ;
Ishrat, Romana .
FRONTIERS IN PHARMACOLOGY, 2022, 12
[5]   Human gene expression profiling identifies key therapeutic targets in tuberculosis infection: A systematic network meta-analysis [J].
Alam, Aftab ;
Imam, Nikhat ;
Siddiqui, Mohd Faizan ;
Ali, Md Kaisar ;
Ahmed, Mohd Murshad ;
Ishrat, Romana .
INFECTION GENETICS AND EVOLUTION, 2021, 87
[6]   Implementation of non-communicable disease policies from 2015 to 2020: a geopolitical analysis of 194 countries [J].
Allen, Luke N. ;
Wigley, Simon ;
Holmer, Hampus .
LANCET GLOBAL HEALTH, 2021, 9 (11) :E1528-E1538
[7]   Host-directed therapies to combat tuberculosis and associated non-communicable diseases [J].
Baindara, Piyush .
MICROBIAL PATHOGENESIS, 2019, 130 :156-168
[8]  
Balwan WK., 2021, Saudi J. Med. Pharm. Sci, V7, P179, DOI [10.36348/sjmps.202v07i04.00x, DOI 10.36348/SJMPS.202V07I04.00X, 10.36348/sjmps.2021.v07i04.003]
[9]   Diabetes Mellitus as a Risk Factor for Parkinson's Disease: a Molecular Point of View [J].
Biosa, Alice ;
Outeiro, Tiago F. ;
Bubacco, Luigi ;
Bisaglia, Marco .
MOLECULAR NEUROBIOLOGY, 2018, 55 (11) :8754-8763
[10]   Rheumatoid Arthritis: A Brief Overview of the Treatment [J].
Bullock, Jacqueline ;
Rizvi, Syed A. A. ;
Saleh, Ayman M. ;
Ahmed, Sultan S. ;
Do, Duc P. ;
Ansari, Rais A. ;
Ahmed, Jasmin .
MEDICAL PRINCIPLES AND PRACTICE, 2018, 27 (06) :501-507