Terminology and Guidelines for Diagnostic Assay Development and Validation: Best Practices for Molecular Tests

被引:18
作者
Groth-Helms, Deborah [1 ]
Rivera, Yazmin [2 ]
Martin, Frank N. [3 ]
Arif, Mohammad [4 ]
Sharma, Poonam [5 ]
Castlebury, Lisa A. [6 ]
机构
[1] Agdia Inc, Elkhart, IN 46514 USA
[2] USDA, Anim & Plant Hlth Inspect Serv, Plant Pathogen Confirmatory Diagnost Lab, Sci & Technol Plant Protect & Quarantine, Laurel, MD 20708 USA
[3] USDA, Agr Res Serv, Salinas, CA 93905 USA
[4] Univ Hawaii Manoa, Dept Plant & Environm Protect Sci, Honolulu, HI 96822 USA
[5] Oklahoma State Univ, Inst Biosecur & Microbial Forens, Dept Biochem & Mol Biol, Stillwater, OK 74078 USA
[6] USDA, ARS, Mycol & Nematol Genet Divers & Biol Lab, Beltsville, MD 20705 USA
来源
PHYTOFRONTIERS | 2023年 / 3卷 / 01期
基金
美国食品与农业研究所;
关键词
diagnostics; fitness; precision; repeatability; reproducibility; robustness; sensitivity; specificity; tiers; validation; RUGOSE FRUIT VIRUS; TIME PCR ASSAYS; PHYTOPHTHORA-RAMORUM; IDENTIFICATION; TOMATO; QUANTIFICATION; SPECIFICITY; PRIMERS; MARKERS;
D O I
10.1094/PHYTOFR-05-22-0059-FI
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Effective use of diagnostic assays is essential for the early detection of plant pathogens and mitigation of potential disease impacts. Assay developers require a full understanding of the intended use of a test to address complicating factors that might be observed by an end user and limit the utility of the test and its scope of application in the field. The fitness of a test for a disease prevention application is determined by its performance characteristics, which are selected during assay design and defined during validation. This paper provides guidance to developers by standardizing the descriptions of key validation terms and concepts, including tiers that can be referenced in publications to better communicate the extent to which a test has been validated. These concepts are then applied in the broader context of a strategic approach to validation for various taxa and methods. The aim of this paper is to increase awareness of common pitfalls and gaps encountered during this process, with the goal of increased success in technology transfer. Recommendations are given for improving the efficiency and quality of test development through improved coordination among stakeholders.Copyright (c) 2023 The Author(s). This is an open access article distributed under the CC BY 4.0 International license.
引用
收藏
页码:23 / 35
页数:13
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