Multi-omics analysis reveals the interplay between intratumoral bacteria and glioma

被引:5
作者
Li, Ting [1 ,2 ]
Zhao, Zhanyi [1 ,2 ]
Peng, Meichang [1 ,2 ]
Zhang, Lu [1 ,2 ]
Wang, Cheng [1 ,2 ]
Luo, Feiyang [1 ]
Zeng, Meiqin [1 ,2 ]
Sun, Kaijian [1 ,2 ]
Fang, Zhencheng [1 ]
Luo, Yunhao [1 ]
Xie, Yugu [1 ]
Lv, Cui [1 ]
Wang, Jiaxuan [1 ]
Huang, Jian-Dong [1 ,3 ,4 ,5 ,6 ]
Zhou, Hongwei [1 ]
Sun, Haitao [1 ,2 ,7 ]
机构
[1] Southern Med Univ, Zhujiang Hosp, Guangdong Prov Clin Res Ctr Lab Med, Clin Biobank Ctr,Microbiome Med Ctr,Dept Lab Med, Guangzhou, Peoples R China
[2] Southern Med Univ, Neurosurg Inst Guangdong Prov, Guangdong Prov Key Lab Brain Funct Repair & Regene, Neurosurg Ctr,Natl Key Clin Specialty,Engn Technol, Guangzhou, Peoples R China
[3] Univ Hong Kong, Li Ka Shing Fac Med, Sch Biomed Sci, Hong Kong, Peoples R China
[4] Chinese Acad Sci, Shenzhen Inst Synthet Biol, Shenzhen Inst Adv Technol, Key Lab Quantitat Engn Biol, Shenzhen, Peoples R China
[5] Univ Hong Kong, Shenzhen Hosp, Clin Oncol Ctr, Shenzhen Key Lab Canc Metastasis & Personalized Th, Shenzhen, Peoples R China
[6] Sun Yat Sen Univ, Guangdong Hong Kong Joint Lab RNA Med, Guangzhou, Peoples R China
[7] Southern Med Univ, Guangdong Hong Kong Macao Greater Bay Area Ctr Bra, Key Lab Mental Hlth, Minist Educ, Guangzhou, Peoples R China
关键词
glioma; intratumoral microbiota; metabolomics; multi-omics; Fusobacterium nucleatum; TUMOR MICROBIOME; GUT MICROBIOTA; BRAIN; CANCER;
D O I
10.1128/msystems.00457-24
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Emerging evidence highlights the potential impact of intratumoral microbiota on cancer. However, the microbial composition and function in glioma remains elusive. Consequently, our study aimed to investigate the microbial commun ity composition in glioma tissues and elucidate its role in glioma development. We parallelly performed microbial profiling, transcriptome sequencing, and metabolomics detection on tumor and adjacent normal brain tissues obtained from 50 glioma patients. We employed immunohistochemistry, multicolor immunofluorescence, and fluorescence in situ hybridization (FISH) staining to observe the presence and location of bacteria. Furthermore, an animal model was employed to validate the impact of key bacteria on glioma development. Six genera were found to be significantly enriched in glioma tissues compared to adjacent normal brain tissues, including Fusobacterium, Longibacu lum, Intestinimonas, Pasteurella, Limosilactobacillus, and Arthrobacter. Both bacterial RNA and lipopolysaccharides (LPS) were observed in glioma tissues. Integrated microbiomics, transcriptomics, and metabolomics revealed that genes associated with intratumoral microbes were enriched in multiple synapse-associated pathways and that metabolites associated with intratumoral microbes were (R)-N-methylsalsolinol, N-acetylaspartylglu tamic acid, and N-acetyl- L-aspar tic acid. Further mediation analysis suggested that the intratumoral microbiome may affect the expression of neuron-related genes through bacteria-associated metabolites. In addition, both in vivo and in vitro models of glioma show that Fusobacterium nucleatum promotes glioma proliferation and upregulates CCL2, CXCL1, and CXCL2 levels. Our findings shed light on the intricate interplay between intratumoral bacteria and glioma.
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页数:26
相关论文
共 67 条
[31]   Glioma progression through synaptic activity [J].
Lim-Fat, Mary Jane ;
Wen, Patrick Y. .
NATURE REVIEWS NEUROLOGY, 2020, 16 (01) :6-+
[32]   ω-3 DPA Protected Neurons from Neuroinflammation by Balancing Microglia M1/M2 Polarizations through Inhibiting NF-κB/MAPK p38 Signaling and Activating Neuron-BDNF-PI3K/AKT Pathways [J].
Liu, Baiping ;
Zhang, Yongping ;
Yang, Zhiyou ;
Liu, Meijun ;
Zhang, Cai ;
Zhao, Yuntao ;
Song, Cai .
MARINE DRUGS, 2021, 19 (11)
[33]   N-Acetylaspartylglutamate Synthetase II Synthesizes N-Acetylaspartylglutamylglutamate [J].
Lodder-Gadaczek, Julia ;
Becker, Ivonne ;
Gieselmann, Volkmar ;
Wang-Eckhardt, Lihua ;
Eckhardt, Matthias .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (19) :16693-16706
[34]   N-Acetylaspartate (NAA) and N-Acetylaspartylglutamate (NAAG) Promote Growth and Inhibit Differentiation of Glioma Stem-like Cells [J].
Long, Patrick M. ;
Moffett, John R. ;
Namboodiri, Aryan M. A. ;
Viapiano, Mariano S. ;
Lawler, Sean E. ;
Jaworski, Diane M. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2013, 288 (36) :26188-26200
[35]   Metabolic regulation on the immune environment of glioma through gut microbiota [J].
Lyu, Yingying ;
Yang, Hui ;
Chen, Liang .
SEMINARS IN CANCER BIOLOGY, 2022, 86 :990-997
[36]   Stereospecific occurrence of a parkinsonism-inducing catechol isoquinoline, N-methyl(R)salsolinol, in the human intraventricular fluid [J].
Maruyama, W ;
Narabayashi, H ;
Dostert, P ;
Naoi, M .
JOURNAL OF NEURAL TRANSMISSION, 1996, 103 (8-9) :1069-1076
[37]   STAT4 is expressed in neutrophils and promotes antimicrobial immunity [J].
Mehrpouya-Bahrami, Pegah ;
Moriarty, Alina K. ;
De Melo, Paulo ;
Keeter, W. Coles ;
Alakhras, Nada S. ;
Nelson, Andrew S. ;
Hoover, Madeline ;
Barrios, Maria S. ;
Nadler, Jerry L. ;
Serezani, C. Henrique ;
Kaplan, Mark H. ;
Galkina, Elena, V .
JCI INSIGHT, 2021, 6 (14)
[38]   Signaling at G-protein-coupled serotonin receptors: recent advances and future research directions [J].
Millan, Mark J. ;
Marin, Philippe ;
Bockaert, Joel ;
la Cour, Clotilde Mannoury .
TRENDS IN PHARMACOLOGICAL SCIENCES, 2008, 29 (09) :454-464
[39]   Reporting guidelines for human microbiome research: the STORMS checklist [J].
Mirzayi, Chloe ;
Renson, Audrey ;
Zohra, Fatima ;
Elsafoury, Shaimaa ;
Geistlinger, Ludwig ;
Kasselman, Lora J. ;
Eckenrode, Kelly ;
van de Wijgert, Janneke ;
Loughman, Amy ;
Marques, Francine Z. ;
MacIntyre, David A. ;
Arumugam, Manimozhiyan ;
Azhar, Rimsha ;
Beghini, Francesco ;
Bergstrom, Kirk ;
Bhatt, Ami ;
Bisanz, Jordan E. ;
Braun, Jonathan ;
Bravo, Hector Corrada ;
Buck, Gregory A. ;
Bushman, Frederic ;
Casero, David ;
Clarke, Gerard ;
Carmen Collado, Maria ;
Cotter, Paul D. ;
Cryan, John F. ;
Demmer, Ryan T. ;
Devkota, Suzanne ;
Elinav, Eran ;
Escobar, Juan S. ;
Fettweis, Jennifer ;
Finn, Robert D. ;
Fodor, Anthony A. ;
Forslund, Sofia ;
Franke, Andre ;
Furlanello, Cesare ;
Gilbert, Jack ;
Grice, Elizabeth ;
Haibe-Kains, Benjamin ;
Handley, Scott ;
Herd, Pamela ;
Holmes, Susan ;
Jacobs, Jonathan P. ;
Karstens, Lisa ;
Knight, Rob ;
Knights, Dan ;
Koren, Omry ;
Kwon, Douglas S. ;
Langille, Morgan ;
Lindsay, Brianna .
NATURE MEDICINE, 2021, 27 (11) :1885-1892
[40]   Gut microorganisms act together to exacerbate inflammation in spinal cords [J].
Miyauchi, Eiji ;
Kim, Seok-Won ;
Suda, Wataru ;
Kawasumi, Masami ;
Onawa, Satoshi ;
Taguchi-Atarashi, Naoko ;
Morita, Hidetoshi ;
Taylor, Todd D. ;
Hattori, Masahira ;
Ohno, Hiroshi .
NATURE, 2020, 585 (7823) :102-+