The DNA binding of plant-specific GROWTH-REGULATING FACTOR transcription factors is stabilized by GRF-INTERACTING FACTOR coactivators

被引:0
|
作者
Nosaki, Shohei [1 ,2 ]
Ohtsuka, Masae [2 ]
机构
[1] Univ Tsukuba, Inst Life & Environm Sci, Tsukuba, Ibaraki, Japan
[2] Univ Tsukuba, Tsukuba Plant Innovat Res Ctr T PIRC, Tsukuba, Ibaraki, Japan
基金
日本科学技术振兴机构;
关键词
plant-specific transcription factor; DNA-binding protein; GRF; GIF; LEAF; ETS-1; COMPLEX; SIZE;
D O I
10.1093/bbb/zbaf016
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The plant-specific GROWTH-REGULATING FACTOR (GRF) transcription factor family proteins play crucial role in regulating diverse aspects of plant life. The transcriptional activity of GRFs is known to be enhanced through direct interaction with the GRF-INTERACTING FACTOR (GIF) coactivators. However, it remains unclear how the binding to GIF affects the biochemical ability of GRFs. Herein, we present evidence that GIFs also stabilize the DNA binding of GRFs. A combination of biochemical experiments and AlphaFold-predicted structural models suggests that the GIF-binding domain in GRFs may partially restrict their own DNA binding through direct interaction with the DNA-binding domain in the absence of GIFs. These findings deepen our understanding of the GRF:GIF module in plant regulation and provide a basis for strategies to manipulate this module for agricultural and biotechnological applications.
引用
收藏
页数:8
相关论文
共 50 条
  • [11] Genome-Wide Analysis of Flax (Linum usitatissimum L.) Growth-Regulating Factor (GRF) Transcription Factors
    Lu, Jianyu
    Wang, Zhenhui
    Li, Jinxi
    Zhao, Qian
    Qi, Fan
    Wang, Fu
    Xiaoyang, Chunxiao
    Tan, Guofei
    Wu, Hanlu
    Deyholos, Michael K.
    Wang, Ningning
    Liu, Yingnan
    Zhang, Jian
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (23)
  • [12] Growth-Regulating Factors (GRFs): A Small Transcription Factor Family with Important Functions in Plant Biology
    Omidbakhshfard, Mohammad Amin
    Proost, Sebastian
    Fujikura, Ushio
    Mueller-Roeber, Bernd
    MOLECULAR PLANT, 2015, 8 (07) : 998 - 1010
  • [13] DNA-binding domains of plant-specific transcription factors: structure, function, and evolution
    Yamasaki, Kazuhiko
    Kigawa, Takanori
    Seki, Motoaki
    Shinozaki, Kazuo
    Yokoyama, Shigeyuki
    TRENDS IN PLANT SCIENCE, 2013, 18 (05) : 267 - 276
  • [14] DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors
    Welner, Ditte H.
    Lindemose, Soren
    Grossmann, J. Guenter
    Mollegaard, Niels Erik
    Olsen, Addie N.
    Helgstrand, Charlotte
    Skriver, Karen
    Lo Leggio, Leila
    BIOCHEMICAL JOURNAL, 2012, 444 : 395 - 404
  • [15] CRISPR/Cas9 mutagenesis of the Arabidopsis GROWTH-REGULATING FACTOR (GRF) gene family
    Angulo, Juan
    Astin, Christopher P.
    Bauer, Olivia
    Blash, Kelan J.
    Bowen, Natalee M.
    Chukwudinma, Nneoma J.
    DiNofrio, Austin S.
    Faletti, Donald O.
    Ghulam, Alexa M.
    Gusinde-Duffy, Chloe M.
    Horace, Kamaria J.
    Ingram, Andrew M.
    Isaack, Kylie E.
    Jeong, Geon
    Kiser, Randolph J.
    Kobylanski, Jason S.
    Long, Madeline R.
    Manning, Grace A.
    Morales, Julie M.
    Nguyen, Kevin H.
    Pham, Robin T.
    Phillips, Monthip H.
    Reel, Tanner W.
    Seo, Jenny E.
    Vo, Hiep D.
    Wukoson, Alexander M.
    Yeary, Kathryn A.
    Zheng, Grace Y.
    Lukowitz, Wolfgang
    FRONTIERS IN GENOME EDITING, 2023, 5
  • [16] The regulatory mechanism of SOG1, a plant-specific transcription factor of DNA damage response
    Yoshiyama, Kaoru Okamoto
    Kimura, Seisuke
    GENES & GENETIC SYSTEMS, 2014, 89 (06) : 323 - 323
  • [17] Genome-wide identification and analysis of the growth-regulating factor (GRF) family in sweet cherry
    Deng, Hong
    Wen, Zhuang
    Hou, Qiandong
    Yu, Runrun
    Cai, Xiaowei
    Liu, Ke
    Qiao, Guang
    GENETIC RESOURCES AND CROP EVOLUTION, 2024, 71 (07) : 3881 - 3899
  • [18] Origin and evolutionary analysis of the plant-specific TIFY transcription factor family
    Bai, Youhuang
    Meng, Yijun
    Huang, Donglin
    Qi, Yanhua
    Chen, Ming
    GENOMICS, 2011, 98 (02) : 128 - 136
  • [19] Overexpression of the Transcription Factor GROWTH-REGULATING FACTOR5 Improves Transformation of Dicot and Monocot Species
    Kong, Jixiang
    Martin-Ortigosa, Susana
    Finer, John
    Orchard, Nuananong
    Gunadi, Andika
    Batts, Lou Ann
    Thakare, Dhiraj
    Rush, Bradford
    Schmitz, Oliver
    Stuiver, Maarten
    Olhoft, Paula
    Pacheco-Villalobos, David
    FRONTIERS IN PLANT SCIENCE, 2020, 11
  • [20] Overexpression of the maize GRF10, an endogenous truncated growth-regulating factor protein, leads to reduction in leaf size and plant height
    Lei Wu
    Dengfeng Zhang
    Ming Xue
    Jianjun Qian
    Yan He
    Shoucai Wang
    Journal of Integrative Plant Biology, 2014, 56 (11) : 1053 - 1063