Development and Validation of the MAST ISOPLEX® VTEC Kit for Simultaneous Detection of Shiga Toxin/Verotoxin 1 and 2 (stx1/vt1 and stx2/vt2) with Inhibition Control (IC) in a Rapid Loop-Mediated Isothermal Amplification (LAMP) Multiplex Assay
Loop-mediated isothermal amplification (LAMP) is a cost-effective, rapid, and highly specific method of replicating nucleic acids. Adding multiple targets into a single LAMP assay to create a multiplex format is highly desirable for clinical applications but has been challenging due to a need to develop specific detection techniques and strict primer design criteria. This study describes the evaluation of a rapid triplex LAMP assay, MAST ISOPLEX (R) VTEC, for the simultaneous detection of Shiga toxin/verotoxin 1 and 2 (stx1/vt1 and stx2/vt2) genes in verotoxigenic Escherichia coli (E. coli) (VTEC) isolates with inhibition control (IC) synthetic DNA using a single fluorophore-oligonucleotide probe, MAST ISOPLEX (R) Probes, integrated into the primer set of each target. MAST ISOPLEX (R) Probes used in the MAST ISOPLEX (R) VTEC kit produce fluorescent signals as they integrate with reaction products specific to each target, allowing tracking of multiple amplifications in real time using a real-time analyzer. Initial validation on DNA extracts from fecal cultures and synthetic DNA sequences (gBlocks) showed that the MAST ISOPLEX (R) VTEC kit provides a method for sensitive simultaneous triplex detection in a single assay with a limit of detection (LOD) of less than 100 target copies/assay and 96% and 100% sensitivity and specificity, respectively.
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Univ Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South AfricaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Claassen-Weitz, Shantelle
Shittu, Adebayo O.
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Obafemi Awolowo Univ, Dept Microbiol, Ife, NigeriaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Shittu, Adebayo O.
Ngwarai, Michelle R.
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Univ Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South AfricaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Ngwarai, Michelle R.
Thabane, Lehana
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McMaster Univ, Dept Clin Epidemiol & Biostat, Hamilton, ON, CanadaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Thabane, Lehana
Nicol, Mark P.
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Univ Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Univ Cape Town, Fac Hlth Sci, Inst Infect Dis & Mol Med, Cape Town, South Africa
Groote Schuur Hosp, Natl Hlth Lab Serv South Africa, Cape Town, South AfricaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Nicol, Mark P.
Kaba, Mamadou
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Univ Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Univ Cape Town, Fac Hlth Sci, Inst Infect Dis & Mol Med, Cape Town, South AfricaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
机构:
Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Eribo, Osagie A.
Naidoo, Charissa C.
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Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Stellenbosch Univ, African Microbiome Inst, Fac Med & Hlth Sci, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Naidoo, Charissa C.
Theron, Grant
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Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Stellenbosch Univ, African Microbiome Inst, Fac Med & Hlth Sci, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Theron, Grant
Walzl, Gerhard
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Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Walzl, Gerhard
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du Plessis, Nelita
Chegou, Novel N.
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Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
机构:
St Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Univ Melbourne, Dept Med, Melbourne, Vic, AustraliaSt Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Hamilton, Amy L.
Kamm, Michael A.
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机构:
St Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Univ Melbourne, Dept Med, Melbourne, Vic, AustraliaSt Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Kamm, Michael A.
Ng, Siew C.
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机构:
Chinese Univ Hong Kong, Inst Digest Dis, Li Ka Shing Inst Hlth Sci, Dept Med & Therapeut,Fac Med,State Key Lab Digest, Hong Kong, Hong Kong, Peoples R ChinaSt Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Ng, Siew C.
Morrison, Mark
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h-index: 0
机构:
Univ Queensland, Translat Res Inst, Fac Med, Diamantina Inst, Brisbane, Qld, AustraliaSt Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
机构:
Univ Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South AfricaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Claassen-Weitz, Shantelle
Shittu, Adebayo O.
论文数: 0引用数: 0
h-index: 0
机构:
Obafemi Awolowo Univ, Dept Microbiol, Ife, NigeriaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Shittu, Adebayo O.
Ngwarai, Michelle R.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South AfricaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Ngwarai, Michelle R.
Thabane, Lehana
论文数: 0引用数: 0
h-index: 0
机构:
McMaster Univ, Dept Clin Epidemiol & Biostat, Hamilton, ON, CanadaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Thabane, Lehana
Nicol, Mark P.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Univ Cape Town, Fac Hlth Sci, Inst Infect Dis & Mol Med, Cape Town, South Africa
Groote Schuur Hosp, Natl Hlth Lab Serv South Africa, Cape Town, South AfricaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Nicol, Mark P.
Kaba, Mamadou
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h-index: 0
机构:
Univ Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
Univ Cape Town, Fac Hlth Sci, Inst Infect Dis & Mol Med, Cape Town, South AfricaUniv Cape Town, Fac Hlth Sci, Dept Pathol, Div Med Microbiol, Cape Town, South Africa
机构:
Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Eribo, Osagie A.
Naidoo, Charissa C.
论文数: 0引用数: 0
h-index: 0
机构:
Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Stellenbosch Univ, African Microbiome Inst, Fac Med & Hlth Sci, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Naidoo, Charissa C.
Theron, Grant
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h-index: 0
机构:
Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Stellenbosch Univ, African Microbiome Inst, Fac Med & Hlth Sci, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Theron, Grant
Walzl, Gerhard
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h-index: 0
机构:
Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
Walzl, Gerhard
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机构:
du Plessis, Nelita
Chegou, Novel N.
论文数: 0引用数: 0
h-index: 0
机构:
Stellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, DSI NRF Ctr Excellence Biomed TB Res, South African Med Res Council Ctr TB Res,Div Mol B, ZA-8000 Cape Town, South Africa
机构:
St Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Univ Melbourne, Dept Med, Melbourne, Vic, AustraliaSt Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Hamilton, Amy L.
Kamm, Michael A.
论文数: 0引用数: 0
h-index: 0
机构:
St Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Univ Melbourne, Dept Med, Melbourne, Vic, AustraliaSt Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Kamm, Michael A.
Ng, Siew C.
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Univ Hong Kong, Inst Digest Dis, Li Ka Shing Inst Hlth Sci, Dept Med & Therapeut,Fac Med,State Key Lab Digest, Hong Kong, Hong Kong, Peoples R ChinaSt Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia
Ng, Siew C.
Morrison, Mark
论文数: 0引用数: 0
h-index: 0
机构:
Univ Queensland, Translat Res Inst, Fac Med, Diamantina Inst, Brisbane, Qld, AustraliaSt Vincents Hosp, Dept Gastroenterol, Melbourne, Vic, Australia