Recent progress and applications of single-cell sequencing technology in breast cancer

被引:5
作者
Hawsawi, Yousef M. [1 ,2 ]
Khoja, Basmah [1 ]
Aljaylani, Abdullah Omar [1 ]
Jaha, Raniah [1 ]
Alderbi, Rasha Mohammed [1 ]
Alnuman, Huda [1 ]
Khan, Mohammed I. [1 ,2 ]
机构
[1] King Faisal Specialist Hosp & Res Ctr, Res Ctr, Jeddah, Saudi Arabia
[2] Al Faisal Univ, Coll Med, Dept Biochem & Mol Med, Riyadh, Saudi Arabia
关键词
single-cell sequencing; breast cancer; tumor heterogeneity; microenvironment; personalized therapy;
D O I
10.3389/fgene.2024.1417415
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Single-cell RNA sequencing (scRNA-seq) technology enables the precise analysis of individual cell transcripts with high sensitivity and throughput. When integrated with multiomics technologies, scRNA-seq significantly enhances the understanding of cellular diversity, particularly within the tumor microenvironment. Similarly, single-cell DNA sequencing has emerged as a powerful tool in cancer research, offering unparalleled insights into the genetic heterogeneity and evolution of tumors. In the context of breast cancer, this technology holds substantial promise for decoding the intricate genomic landscape that drives disease progression, treatment resistance, and metastasis. By unraveling the complexities of tumor biology at a granular level, single-cell DNA sequencing provides a pathway to advancing our comprehension of breast cancer and improving patient outcomes through personalized therapeutic interventions. As single-cell sequencing technology continues to evolve and integrate into clinical practice, its application is poised to revolutionize the diagnosis, prognosis, and treatment strategies for breast cancer. This review explores the potential of single-cell sequencing technology to deepen our understanding of breast cancer, highlighting key approaches, recent advancements, and the role of the tumor microenvironment in disease plasticity. Additionally, the review discusses the impact of single-cell sequencing in paving the way for the development of personalized therapies.
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页数:10
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共 56 条
[1]  
Alanazi Ibrahim O, 2021, J Oncol, V2021, P6180337, DOI [10.1155/2021/6180337, 10.1155/2021/6180337]
[2]   Potential Impact of PI3K-AKT Signaling Pathway Genes, KLF-14, MDM4, miRNAs 27a, miRNA-196a Genetic Alterations in the Predisposition and Progression of Breast Cancer Patients [J].
Alzahrani, Othman R. ;
Mir, Rashid ;
Alatwi, Hanan E. ;
Hawsawi, Yousef M. ;
Alharbi, Amnah A. ;
Alessa, Abdulrahman H. ;
Albalawi, Elham Saleh ;
Elfaki, Imadeldin ;
Alalawi, Yousef ;
Moharam, Laila ;
El-Ghaiesh, Sabah H. .
CANCERS, 2023, 15 (04)
[3]   Identification and Characterization of Novel Mutations in Chronic Kidney Disease (CKD) and Autosomal Dominant Polycystic Kidney Disease (ADPKD) in Saudi Subjects by Whole-Exome Sequencing [J].
Alzahrani, Othman R. R. ;
Alatwi, Hanan E. E. ;
Alharbi, Amnah A. A. ;
Alessa, Abdulrahman H. H. ;
Al-Amer, Osama M. M. ;
Alanazi, Abeer F. R. ;
Shams, Anwar M. M. ;
Alomari, Esra'a ;
Naser, Abdallah Y. Y. ;
Alzahrani, Faisal A. A. ;
Hosawi, Salman ;
Alghamdi, Saeed M. M. ;
Abdali, Wed A. A. ;
Elfaki, Imadeldin ;
Hawsawi, Yousef M. M. .
MEDICINA-LITHUANIA, 2022, 58 (11)
[4]   Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment [J].
Azizi, Elham ;
Carr, Ambrose J. ;
Plitas, George ;
Cornish, Andrew E. ;
Konopacki, Catherine ;
Prabhakaran, Sandhya ;
Nainys, Juozas ;
Wu, Kenmin ;
Kiseliovas, Vaidotas ;
Setty, Manu ;
Choi, Kristy ;
Fromme, Rachel M. ;
Phuong Dao ;
McKenney, Peter T. ;
Wasti, Ruby C. ;
Kadaveru, Krishna ;
Mazutis, Linas ;
Rudensky, Alexander Y. ;
Pe'er, Dana .
CELL, 2018, 174 (05) :1293-+
[5]   Nitric Oxide Synthase Potentiates the Resistance of Cancer Cell Lines to Anticancer Chemotherapeutics [J].
Barnawi, Ibrahim ;
Hawsawi, Yousef M. ;
Dash, Philip ;
Oyouni, Atif Abdulwahab A. ;
Mustafa, Syed Khalid ;
Hussien, Nahed A. ;
Al-Amer, Osama ;
Alomar, Suliman ;
Mansour, Lamjed .
ANTI-CANCER AGENTS IN MEDICINAL CHEMISTRY, 2022, 22 (07) :1397-1406
[6]   Spatially and functionally distinct subclasses of breast cancer-associated fibroblasts revealed by single cell RNA sequencing [J].
Bartoschek, Michael ;
Oskolkov, Nikolay ;
Bocci, Matteo ;
Lovrot, John ;
Larsson, Christer ;
Sommarin, Mikael ;
Madsen, Chris D. ;
Lindgren, David ;
Pekar, Gyula ;
Karlsson, Goran ;
Ringner, Markus ;
Bergh, Jonas ;
Bjorklund, Asa ;
Pietras, Kristian .
NATURE COMMUNICATIONS, 2018, 9
[7]   Breast cancer: Biology, biomarkers, and treatments [J].
Barzaman, Khadijeh ;
Karami, Jafar ;
Zarei, Zeinab ;
Hosseinzadeh, Aysooda ;
Kazemi, Mohammad Hossein ;
Moradi-Kalbolandi, Shima ;
Safari, Elahe ;
Farahmand, Leila .
INTERNATIONAL IMMUNOPHARMACOLOGY, 2020, 84
[8]   Single-cell multiomics sequencing and analyses of human colorectal cancer [J].
Bian, Shuhui ;
Hou, Yu ;
Zhou, Xin ;
Li, Xianlong ;
Yong, Jun ;
Wang, Yicheng ;
Wang, Wendong ;
Yan, Jia ;
Hu, Boqiang ;
Guo, Hongshan ;
Wang, Jilian ;
Gao, Shuai ;
Mao, Yunuo ;
Dong, Ji ;
Zhu, Ping ;
Xiu, Dianrong ;
Yan, Liying ;
Wen, Lu ;
Qiao, Jie ;
Tang, Fuchou ;
Fu, Wei .
SCIENCE, 2018, 362 (6418) :1060-+
[9]   Genetics and Genomics of Breast Cancer: update and translational perspectives [J].
Biancolella, Michela ;
Testa, Barbara ;
Salehi, Leila Baghernajad ;
D'Apice, Maria Rosaria ;
Novelli, Giuseppe .
SEMINARS IN CANCER BIOLOGY, 2021, 72 :27-35
[10]   Multiclonal Invasion in Breast Tumors Identified by Topographic Single Cell Sequencing [J].
Casasent, Anna K. ;
Schalck, Aislyn ;
Gao, Ruli ;
Sei, Emi ;
Long, Annalyssa ;
Pangburn, William ;
Casasent, Tod ;
Meric-Bernstam, Funda ;
Edgerton, Mary E. ;
Navin, Nicholas E. .
CELL, 2018, 172 (1-2) :205-+