Gordonia;
Lake Champlain;
bioremediation;
petroleum degradation;
plastic degradation;
rubber degradation;
D O I:
10.1128/mra.00876-24
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
Here, we present the draft genome sequence of Gordonia sp. ABKF26, a potential petroleum, plastic, and rubber degrading bacterium isolated from Lake Champlain. The assembled genome comprises a 6.0-Mb chromosome with a GC content of 67.8%. Gordonia sp. ABKF26 is predicted to be lysogenized by one intact 52.2 Kbp prophage.
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Bartels, Daniela
;
Best, Aaron A.
论文数: 0引用数: 0
h-index: 0
机构:
Hope Coll, Holland, MI 49423 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Best, Aaron A.
;
DeJongh, Matthew
论文数: 0引用数: 0
h-index: 0
机构:
Hope Coll, Holland, MI 49423 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
DeJongh, Matthew
;
Disz, Terrence
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Disz, Terrence
;
Edwards, Robert A.
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Edwards, Robert A.
;
Formsma, Kevin
论文数: 0引用数: 0
h-index: 0
机构:
Hope Coll, Holland, MI 49423 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Formsma, Kevin
;
Gerdes, Svetlana
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Gerdes, Svetlana
;
Glass, Elizabeth M.
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Glass, Elizabeth M.
;
Kubal, Michael
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Kubal, Michael
;
Meyer, Folker
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Meyer, Folker
;
Olsen, Gary J.
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Illinois, Dept Microbiol, Urbana, IL 61801 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Olsen, Gary J.
;
Olson, Robert
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Olson, Robert
;
Osterman, Andrei L.
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Burnham Inst, La Jolla, CA 92037 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Osterman, Andrei L.
;
Overbeek, Ross A.
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Overbeek, Ross A.
;
McNeil, Leslie K.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Illinois, Natl Ctr Supercomp Applicat, Urbana, IL 61801 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
McNeil, Leslie K.
;
Paarmann, Daniel
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Paarmann, Daniel
;
Paczian, Tobias
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Paczian, Tobias
;
Parrello, Bruce
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Parrello, Bruce
;
Pusch, Gordon D.
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Pusch, Gordon D.
;
Reich, Claudia
论文数: 0引用数: 0
h-index: 0
机构:
Univ Illinois, Natl Ctr Supercomp Applicat, Urbana, IL 61801 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Reich, Claudia
;
Stevens, Rick
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Stevens, Rick
;
Vassieva, Olga
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Vassieva, Olga
;
Vonstein, Veronika
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Vonstein, Veronika
;
Wilke, Andreas
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Wilke, Andreas
;
Zagnitko, Olga
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
机构:
Wageningen Univ, Bioinformat Grp, Wageningen, NetherlandsTech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
Terlouw, Barbara R.
;
Metcalf, William W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Illinois, Dept Microbiol, Urbana, IL USA
Univ Illinois, Inst Genom Biol, Urbana, IL USATech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
Metcalf, William W.
;
论文数: 引用数:
h-index:
机构:
Helfrich, Eric J. N.
;
van Wezel, Gilles P.
论文数: 0引用数: 0
h-index: 0
机构:
Leiden Univ, Inst Biol, Mol Biotechnol, Leiden, NetherlandsTech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
van Wezel, Gilles P.
;
Medema, Marnix H.
论文数: 0引用数: 0
h-index: 0
机构:
Wageningen Univ, Bioinformat Grp, Wageningen, NetherlandsTech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
Medema, Marnix H.
;
Weber, Tilmann
论文数: 0引用数: 0
h-index: 0
机构:
Tech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, DenmarkTech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
机构:
Univ Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USAUniv Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USA
Kolmogorov, Mikhail
;
Yuan, Jeffrey
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Grad Program Bioinformat & Syst Biol, San Diego, CA 92103 USAUniv Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USA
Yuan, Jeffrey
;
Lin, Yu
论文数: 0引用数: 0
h-index: 0
机构:
Australian Natl Univ, Res Sch Comp Sci, Canberra, ACT, AustraliaUniv Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USA
Lin, Yu
;
Pevzner, Pavel A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USAUniv Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USA
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Bartels, Daniela
;
Best, Aaron A.
论文数: 0引用数: 0
h-index: 0
机构:
Hope Coll, Holland, MI 49423 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Best, Aaron A.
;
DeJongh, Matthew
论文数: 0引用数: 0
h-index: 0
机构:
Hope Coll, Holland, MI 49423 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
DeJongh, Matthew
;
Disz, Terrence
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Disz, Terrence
;
Edwards, Robert A.
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Edwards, Robert A.
;
Formsma, Kevin
论文数: 0引用数: 0
h-index: 0
机构:
Hope Coll, Holland, MI 49423 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Formsma, Kevin
;
Gerdes, Svetlana
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Gerdes, Svetlana
;
Glass, Elizabeth M.
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Glass, Elizabeth M.
;
Kubal, Michael
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Kubal, Michael
;
Meyer, Folker
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Meyer, Folker
;
Olsen, Gary J.
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Illinois, Dept Microbiol, Urbana, IL 61801 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Olsen, Gary J.
;
Olson, Robert
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Olson, Robert
;
Osterman, Andrei L.
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Burnham Inst, La Jolla, CA 92037 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Osterman, Andrei L.
;
Overbeek, Ross A.
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Overbeek, Ross A.
;
McNeil, Leslie K.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Illinois, Natl Ctr Supercomp Applicat, Urbana, IL 61801 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
McNeil, Leslie K.
;
Paarmann, Daniel
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Paarmann, Daniel
;
Paczian, Tobias
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Paczian, Tobias
;
Parrello, Bruce
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Parrello, Bruce
;
Pusch, Gordon D.
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Pusch, Gordon D.
;
Reich, Claudia
论文数: 0引用数: 0
h-index: 0
机构:
Univ Illinois, Natl Ctr Supercomp Applicat, Urbana, IL 61801 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Reich, Claudia
;
Stevens, Rick
论文数: 0引用数: 0
h-index: 0
机构:
Argonne Natl Lab, Div Math & Comp Sci, Argonne, IL 60439 USA
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Stevens, Rick
;
Vassieva, Olga
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Vassieva, Olga
;
Vonstein, Veronika
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Vonstein, Veronika
;
Wilke, Andreas
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Computat Inst, Chicago, IL 60637 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
Wilke, Andreas
;
Zagnitko, Olga
论文数: 0引用数: 0
h-index: 0
机构:
Fellowship Interpretat Genomes, Burr Ridge, IL 60527 USAFellowship Interpretat Genomes, Burr Ridge, IL 60527 USA
机构:
Wageningen Univ, Bioinformat Grp, Wageningen, NetherlandsTech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
Terlouw, Barbara R.
;
Metcalf, William W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Illinois, Dept Microbiol, Urbana, IL USA
Univ Illinois, Inst Genom Biol, Urbana, IL USATech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
Metcalf, William W.
;
论文数: 引用数:
h-index:
机构:
Helfrich, Eric J. N.
;
van Wezel, Gilles P.
论文数: 0引用数: 0
h-index: 0
机构:
Leiden Univ, Inst Biol, Mol Biotechnol, Leiden, NetherlandsTech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
van Wezel, Gilles P.
;
Medema, Marnix H.
论文数: 0引用数: 0
h-index: 0
机构:
Wageningen Univ, Bioinformat Grp, Wageningen, NetherlandsTech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
Medema, Marnix H.
;
Weber, Tilmann
论文数: 0引用数: 0
h-index: 0
机构:
Tech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, DenmarkTech Univ Denmark, Novo Nord Fdn Ctr Biosustainabil, Lyngby, Denmark
机构:
Univ Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USAUniv Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USA
Kolmogorov, Mikhail
;
Yuan, Jeffrey
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Grad Program Bioinformat & Syst Biol, San Diego, CA 92103 USAUniv Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USA
Yuan, Jeffrey
;
Lin, Yu
论文数: 0引用数: 0
h-index: 0
机构:
Australian Natl Univ, Res Sch Comp Sci, Canberra, ACT, AustraliaUniv Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USA
Lin, Yu
;
Pevzner, Pavel A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USAUniv Calif San Diego, Dept Comp Sci & Engn, San Diego, CA 92103 USA