Reliable estrogen-related prognostic signature for uterine corpus endometrial carcinoma

被引:0
|
作者
Li, Mojuan [1 ,2 ]
Wang, Shuai [3 ]
Huang, Hao [2 ]
Li, Li [1 ,3 ]
机构
[1] Jinan Univ, Affiliated Hosp 1, Dept Obstet & Gynecol, Guangzhou 511500, Guangdong, Peoples R China
[2] South China Univ Technol, Affiliated Hosp 6, Dept Obstet & Gynecol, Foshan 528000, Guangdong, Peoples R China
[3] Guangdong Women & Children Hosp, Dept Obstet & Gynecol, Guangzhou 511500, Guangdong, Peoples R China
关键词
Uterine corpus endometrial carcinoma; Estrogen; Single cell RNA sequencing; Risk score model; CANCER; EXPRESSION; GROWTH;
D O I
10.1016/j.compbiolchem.2024.108216
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Uterine corpus endometrial carcinoma (UCEC) is a predominant gynecological malignancy worldwide. Overdosed estrogen exposure has been widely known as a crucial risk factor for UCEC patients. The purpose of this work is to explore crucial estrogen-related genes (ERGs) in UCEC. Methods: UCEC scRNA-seq data, bulk RNA data, and ERGs were obtained from GEO, TCGA, and Molecular Signature Database, respectively. Differential expression analysis and cross analysis determined the candidate genes, and optimal genes in risk score were obtained after univariate Cox regression analysis, LASSO Cox regression analysis, and multivariate Cox regression analysis. The functional information was revealed by GO, KEGG, and GSVA enrichment analyses. CCK8 assay was used to detect the drug sensitivity. Results: After cross analysis of the differentially expressed genes and the 8734 ERGs, 86 differentially expressed ERGs were identified in UCEC, which were significantly enriched in some immune related pathways and microbiota related pathways. Of them, the most optimal 8 ERGs were obtained to build prognostic risk score, including GAL, PHGDH, SLC7A2, HNMT, CLU, AREG, MACC1, and HMGA1. The risk score could reliably predict patient prognosis, and high-risk patients had worse prognosis. Higher HMGA1 gene expression exhibited higher sensitivity to Osimertinib. Conclusions: Predictive risk score based on 8 ERGs exhibited excellent prognostic value in UCEC patients, and high-risk patients had inferior survival. UCEC patients with distinct prognoses showed different tumor immune microenvironment.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] Identification of an Immune-Related LncRNA Prognostic Signature in Uterine Corpus Endometrial Carcinoma Patients
    Sun, Xiao-Xi
    Wen, Hui-Qin
    Zhan, Bing-Xiang
    Yang, Peng
    CLINICAL LABORATORY, 2021, 67 (11) : 2577 - 2588
  • [2] Development of an Oxidative Phosphorylation-Related and Immune Microenvironment Prognostic Signature in Uterine Corpus Endometrial Carcinoma
    Liu, Jinhui
    Chen, Tian
    Yang, Min
    Zhong, Zihang
    Ni, Senmiao
    Yang, Sheng
    Shao, Fang
    Cai, Lixin
    Bai, Jianling
    Yu, Hao
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [3] Identification and Validation of Cuproptosis-Related Prognostic Signature and Associated Regulatory Axis in Uterine Corpus Endometrial Carcinoma
    Chen, Yun
    FRONTIERS IN GENETICS, 2022, 13
  • [4] Development of a necroptosis-related prognostic model for uterine corpus endometrial carcinoma
    Qi Zhang
    Yongfu Luo
    Shiyao Zhang
    Qianpeng Huang
    Gang Liu
    Scientific Reports, 14
  • [5] Development of a necroptosis-related prognostic model for uterine corpus endometrial carcinoma
    Zhang, Qi
    Luo, Yongfu
    Zhang, Shiyao
    Huang, Qianpeng
    Liu, Gang
    SCIENTIFIC REPORTS, 2024, 14 (01)
  • [6] Glycosyltransferase-related prognostic and diagnostic biomarkers of uterine corpus endometrial carcinoma
    Wu, Jiaoqi
    Zhou, Xiaozhu
    Ren, Jie
    Zhang, Zhen
    Ju, Haoyu
    Diao, Xiaoqi
    Jiang, Shuyi
    Zhang, Jing
    COMPUTERS IN BIOLOGY AND MEDICINE, 2023, 163
  • [7] Prognostic signature construction and immunotherapy response analysis for Uterine Corpus Endometrial Carcinoma based on cuproptosis-related lncRNAs
    Zhang, Xu
    Ye, Zhiqiang
    Xiao, Guohong
    He, Ting
    COMPUTERS IN BIOLOGY AND MEDICINE, 2023, 159
  • [8] Identification of the Prognostic Signature Associated With Tumor Immune Microenvironment of Uterine Corpus Endometrial Carcinoma Based on Ferroptosis-Related Genes
    Liu, Jinhui
    Wang, Yichun
    Meng, Huangyang
    Yin, Yin
    Zhu, Hongjun
    Ni, Tingting
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [9] Identification of immune-related gene signature for predicting prognosis in uterine corpus endometrial carcinoma
    Siyuan Song
    Haoqing Gu
    Jingzhan Li
    Peipei Yang
    Xiafei Qi
    Jiatong Liu
    Jiayu Zhou
    Ye Li
    Peng Shu
    Scientific Reports, 13
  • [10] Identification of immune-related gene signature for predicting prognosis in uterine corpus endometrial carcinoma
    Song, Siyuan
    Gu, Haoqing
    Li, Jingzhan
    Yang, Peipei
    Qi, Xiafei
    Liu, Jiatong
    Zhou, Jiayu
    Li, Ye
    Shu, Peng
    SCIENTIFIC REPORTS, 2023, 13 (01)