Synthesis of Pd(II) and Ag(I) complexes with pyrazole thiosemicarbazone: Characterization of the molecular structure by DFT/X-ray diffraction, in vitro antibacterial activity and molecular docking study

被引:0
|
作者
Brinez-Ortega, Edwin [1 ,2 ]
Sanchez-Mora, Arturo
Macias, Mario A. [4 ]
Brandao, Pedro F. B. [5 ]
Chaparro, Diego [6 ]
Morales-Morales, David [3 ]
Burgos, A. E. [1 ]
机构
[1] Univ Nacl Colombia, Fac Ciencias, Dept Quim, Grp Invest Quim Coordinac & Bioinorgan, Ave carrera 30,N 45-03, Bogota 111321, DC, Colombia
[2] Univ ECCI Sede Bogota, Dept Ciencias Bas, Bogota, DC, Colombia
[3] Univ Nacl Autonoma Mexico, Inst Quim, Circuito Exterior S-N, Mexico City 04510, Mexico
[4] Univ los Andes, Dept Quim, Cristalog & Quim Mat, Bogota 111711, Colombia
[5] Univ Nacl Colombia Sede Bogota ?, Fac Ciencias, Dept Quim, Lab Microbiol Ambiental & Aplicada, Bogota, DC, Colombia
[6] Univ Melbourne, Dept Chem Engn, Parkville, Vic 3010, Australia
关键词
Antibacterial activity; DFT; Molecular docking; Pd(II) and Ag(I) complexes; Thiosemicarbazones; BASE LIGANDS SYNTHESIS; PALLADIUM(II) COMPLEXES; SPECTROSCOPIC CHARACTERIZATION; ANTIMICROBIAL ACTIVITY; BIOLOGICAL EVALUATION; SILVER(I) COMPLEXES; CRYSTAL-STRUCTURES; DNA; DERIVATIVES; BINDING;
D O I
10.1016/j.molstruc.2025.141557
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
New Pd(II) and Ag(I) complexes derived from (2E)-2-[(1,3-diphenyl-1H-pyrazol-4-yl)methylidene]-N-ethylhydrazine-1-carbothioamide (L) were synthesized. The compounds, with general formulas [PdL2]Cl2 and [AgL (phen)]NO3, 1,10-phenanthroline (phen), were characterized by physicochemical and theoretical techniques. Thus, the results obtained by IR, Raman, UV-Vis, NMR, and mass spectrometry data allowed the determination of the structures of complexes synthesized, indicating the chelation of ligand to the metals occurs through the sulfur atoms of thiol and the nitrogen of the azomethine group. Single-crystal X-ray diffraction (XRD) analysis revealed the formation of the E-isomer of the ligand. These results were confirmed with DFT calculations, in which atomic charge and molecular orbital analyses were conducted to predict the reactivity and stability of the compounds. The in vitro antibacterial assays were performed against Gram-positive (Staphylococcus aureus) and Gram-negative (Escherichia coli) bacteria. With the Ag(I) complex exhibiting the best activity (MIC = 35.74 mu M) against S. aureus, this being attributed to a synergistic effect between the Ag(I) ion, the pyrazole-derived thiosemicarbazone ligand and the 1,10-phenanthroline coligand. Finally, the in silico molecular docking studies showed that all the compounds have a potential antibacterial effect, especially the complex [PdL2]Cl2 with a more negative scoring energy value indicating a stronger interaction between the macromolecules and the ligand.
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页数:11
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