Subtyping colorectal cancer based on septic shock-associated genes: prognosis and immune characteristics

被引:0
作者
Zhao, Jinkai [1 ]
Chen, Jiaan [1 ]
Zhang, Jiancheng [2 ]
Pan, Xuming [2 ]
Xu, Buhai [2 ]
Miao, Jinli [3 ]
Wang, Wenmin [3 ]
Jin, Guangjun [2 ]
机构
[1] Zhejiang Chinese Med Univ, Sch Clin Med 2, Hangzhou, Zhejiang, Peoples R China
[2] Zhejiang Chinese Med Univ, Dept Emergency, Affiliated Hosp 2, Hangzhou, Zhejiang, Peoples R China
[3] Tsinghua Univ, Yangtze River Delta Biol Med Res & Dev Ctr Zhejian, Yangtze Delta Reg Inst, Hangzhou, Zhejiang, Peoples R China
关键词
clustering; colorectal cancer; immune; septic shock; sepsis; SEPSIS;
D O I
10.3389/fgene.2024.1468424
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background Sepsis and colorectal cancer (CRC) are leading causes of death. Given their mutual dependence for susceptibility, we used bioinformatics to explore potential connections between septic shock (SS) and CRC.Methods We identified 452 co-expressed genes between SS-related differential expression genes (SS-DEGs) and CRC patient-expressed genes (TCGA-CRC genes). CRC samples were categorized into two cluster subgroups through hierarchical clustering. We then compared the prognosis and immune landscapes of the two cluster subgroups through survival analysis, immune microenvironment analysis, and immune therapy response evaluation.Results Clustering analysis of the 452 CRC patient-expressed SS-DEGs identified two subtypes: SS-like CRC (SL-CRC) and non-SS-like CRC (NSL-CRC). There were no significant differences in overall survival between the CRC subtypes. However, the subtypes displayed significant differences in immune score, stromal score, and ESTIMATE score. Based on immune therapy databases, there were also significant differences in responses to anti-CTLA-4 and anti-PD-1 immune checkpoint inhibitors between the subtypes.Conclusion Our study reveals significant differences in the immune microenvironment and immune therapy responses between SL-CRC and NSL-CRC subtypes. These findings provide a foundation for identifying new therapeutic targets and developing personalized treatment strategies for specific CRC subtypes.
引用
收藏
页数:9
相关论文
共 50 条
  • [21] Molecular subtyping and the construction of a predictive model of colorectal cancer based on ion channel genes
    Ai, Lian-jie
    Li, Guo-dong
    Chen, Gang
    Sun, Zi-quan
    Zhang, Jin-ning
    Liu, Ming
    EUROPEAN JOURNAL OF MEDICAL RESEARCH, 2024, 29 (01)
  • [22] Colorectal cancer subtyping and prognostic model construction based on interleukin-related genes
    Song, Jintian
    Chen, Jianbin
    Chen, Yigui
    Wang, Yi
    Zheng, Liang
    Yu, Hui
    Chen, Changjiang
    PHYSIOLOGICAL GENOMICS, 2024, 56 (05) : 367 - 383
  • [23] Prognostic Signatures Based on Thirteen Immune-Related Genes in Colorectal Cancer
    Ma, Xiao-Bo
    Xu, Yuan-Yuan
    Zhu, Meng-Xuan
    Wang, Lu
    FRONTIERS IN ONCOLOGY, 2021, 10
  • [24] Identification of immune-related mitochondrial metabolic disorder genes in septic shock using bioinformatics and machine learning
    Cui, Yu-Hui
    Wu, Chun-Rong
    Huang, Li-Ou
    Xu, Dan
    Tang, Jian-Guo
    HEREDITAS, 2024, 161 (01):
  • [25] Hypoxia and lipid metabolism related genes drive proliferation migration and immune infiltration mechanisms in colorectal cancer subtyping
    Huang, Shansong
    Wang, Huiying
    Cao, Jiaqing
    Pang, Qiang
    SCIENTIFIC REPORTS, 2025, 15 (01):
  • [26] Bioinformatics-based identification of key genes and pathways associated with colorectal cancer diagnosis, treatment, and prognosis
    Wang, Chaochao
    Zhang, Li
    MEDICINE, 2022, 101 (37) : E30619
  • [27] Spatial distribution pattern of immune cells is associated with patient prognosis in colorectal cancer
    Shen, Rongfang
    Huang, Ying
    Kong, Deyang
    Ma, Wenhui
    Liu, Jie
    Zhang, Haizeng
    Cheng, Shujun
    Feng, Lin
    JOURNAL OF TRANSLATIONAL MEDICINE, 2024, 22 (01)
  • [28] Molecular characteristics, clinical significance, and immune landscape of extracellular matrix remodeling-associated genes in colorectal cancer
    Chen, Wenlong
    Wang, Yiwen
    Gu, Haitao
    Zhang, Yi
    Chen, Cong
    Yu, Tingting
    Chen, Tao
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [29] Identification of a novel signature based on RNA methylation-associated anoikis-related genes for predicting prognosis and characterizing immune landscape in colorectal cancer
    Zhu, Liye
    Qiu, Xinze
    Liang, Shengmei
    Huang, Shanpei
    Ning, Qiting
    Chen, Xingmei
    Chen, Ni
    Qin, Longjie
    Huang, Jiean
    Liu, Shiquan
    DISCOVER ONCOLOGY, 2025, 16 (01)
  • [30] Long-term prognosis of septic shock in cancer patients
    Camou, Fabrice
    Didier, Marion
    Leguay, Thibaut
    Milpied, Noel
    Daste, Amaury
    Ravaud, Alain
    Mourissoux, Gaelle
    Guisset, Olivier
    Issa, Nahema
    SUPPORTIVE CARE IN CANCER, 2020, 28 (03) : 1325 - 1333