Integrated Transcriptome and Proteome Analysis Provides New Insights into Starch and Sucrose Metabolism and Regulation of Corm Expansion Process in Colocasia esculenta
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作者:
Zou, Chengwu
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Guangxi Univ, Coll Agr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Nanning 530004, Peoples R ChinaGuangxi Univ, Coll Agr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Nanning 530004, Peoples R China
Zou, Chengwu
[1
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He, Fanglian
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Guangxi Zhuang Autonomous Reg Acad Agr Sci, Vegetable Res Inst, Nanning 530007, Peoples R ChinaGuangxi Univ, Coll Agr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Nanning 530004, Peoples R China
He, Fanglian
[2
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Li, Huinan
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Guangxi Zhuang Autonomous Reg Acad Agr Sci, Vegetable Res Inst, Nanning 530007, Peoples R ChinaGuangxi Univ, Coll Agr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Nanning 530004, Peoples R China
Li, Huinan
[2
]
Liu, Lili
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机构:
Lipu City Agr & Rural Bur, Lipu 546600, Peoples R ChinaGuangxi Univ, Coll Agr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Nanning 530004, Peoples R China
Liu, Lili
[3
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Qiu, Zuyang
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Lipu City Agr & Rural Bur, Lipu 546600, Peoples R ChinaGuangxi Univ, Coll Agr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Nanning 530004, Peoples R China
Qiu, Zuyang
[3
]
Dong, Weiqing
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Guangxi Zhuang Autonomous Reg Acad Agr Sci, Vegetable Res Inst, Nanning 530007, Peoples R ChinaGuangxi Univ, Coll Agr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Nanning 530004, Peoples R China
Dong, Weiqing
[2
]
机构:
[1] Guangxi Univ, Coll Agr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Nanning 530004, Peoples R China
[2] Guangxi Zhuang Autonomous Reg Acad Agr Sci, Vegetable Res Inst, Nanning 530007, Peoples R China
[3] Lipu City Agr & Rural Bur, Lipu 546600, Peoples R China
The global significance of Colocasia esculenta, a tuber crop rich in nutritional value and starch, prompts further investigation into its corm development. Background: Previous studies have focused on starch accumulation within the tubers, yet the genetic and proteomic basis of corm expansion remains largely unexplored. This study aims to elucidate the key genes and proteins involved in this process. Methods: We selected 'Lipu Taro No.1' and conducted a longitudinal starch content analysis, full-length transcriptome sequencing, and a proteomic analysis during three distinct stages of corm development. Results: Our findings reveal a significant increase in both amylose and amylopectin contents as the corm develops, indicating the temporal regulation of starch biosynthesis. The integration of transcriptome and proteomic data identified differentially expressed genes and proteins associated with starch and sucrose metabolism, as well as plant hormone signal transduction. Conclusions: This study delineates a temporal gene expression pattern that is crucial for starch synthesis and provides insights into the regulatory mechanisms controlling corm expansion and starch deposition, offering valuable references for future molecular breeding strategies to enhance taro yield and quality.
机构:
Shandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R ChinaShandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R China
Yang, Liyu
Wu, Qi
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Shandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R ChinaShandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R China
Wu, Qi
Liang, Haiyan
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Shandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R ChinaShandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R China
Liang, Haiyan
Yin, Liang
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Shandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R ChinaShandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R China
Yin, Liang
Shen, Pu
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Shandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R ChinaShandong Acad Agr Sci, Shandong Peanut Res Inst, Chinese Natl Peanut Engn Res Ctr, Qingdao, Peoples R China
机构:
ICAR Indian Agr Res Inst, Div Biochem, New Delhi 110012, India
ICAR Indian Inst Oil Palm Res, Pedavegi 534475, Andhra Pradesh, IndiaICAR Indian Agr Res Inst, Div Biochem, New Delhi 110012, India
Prathap, V
Tyagi, Aruna
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ICAR Indian Agr Res Inst, Div Biochem, New Delhi 110012, IndiaICAR Indian Agr Res Inst, Div Biochem, New Delhi 110012, India
Tyagi, Aruna
Kumar, Suresh
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ICAR Indian Agr Res Inst, Div Biochem, New Delhi 110012, IndiaICAR Indian Agr Res Inst, Div Biochem, New Delhi 110012, India
Kumar, Suresh
Mohapatra, Trilochan
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机构:
Protect Plant Varieties & Farmers Rights Author, New Delhi 110012, IndiaICAR Indian Agr Res Inst, Div Biochem, New Delhi 110012, India
机构:
ARS, Cotton Fiber Biosci Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USAARS, Cotton Fiber Biosci Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USA
Naoumkina, Marina
Hinchliffe, Doug J.
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ARS, Cotton Chem & Utilizat Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USAARS, Cotton Fiber Biosci Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USA
Hinchliffe, Doug J.
Turley, Rickie B.
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ARS, Crop Genet Res Unit, USDA, Mid South Area, Stoneville, MS 38772 USAARS, Cotton Fiber Biosci Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USA
Turley, Rickie B.
Bland, John M.
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ARS, Food Proc & Sensory Qual Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USAARS, Cotton Fiber Biosci Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USA
Bland, John M.
Fang, David D.
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ARS, Cotton Fiber Biosci Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USAARS, Cotton Fiber Biosci Res Unit, USDA, So Reg Res Ctr, New Orleans, LA 70124 USA