Structure-based identification of novel pyrrolo[2,3-d]pyrimidine analogs as potent autotaxin inhibitors

被引:0
作者
Wei, Shangfei [1 ]
Liu, Nan [2 ]
Zhou, Cong [1 ]
Guo, Mengrao [1 ]
Ma, Deyi [1 ]
Lei, Hongrui [1 ]
Zhai, Xin [1 ]
机构
[1] Shenyang Pharmaceut Univ, Key Lab Struct Based Drug Design & Discovery, Minist Educ, Shenyang 110016, Peoples R China
[2] Shenyang Pharmaceut Univ, Sch Pharm, Shenyang 110016, Peoples R China
基金
中国国家自然科学基金;
关键词
Autotaxin inhibitor; Pyrrolo[2,3-d ]pyrimidine; Design & synthesis; Molecular docking; DISCOVERY; BINDING; PLASMA;
D O I
10.1016/j.molstruc.2025.141573
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In recent decades, it has been well established that the down-regulation of the autotaxin-lysophosphatidic acid (ATX-LPA) signaling pathway showed considerable effectiveness in treating various diseases. In order to develop novel potent ATX inhibitors, a series of pyrrolo[2,3-d]pyrimidine derivatives (G1 similar to G22) were designed and synthesized based on the molecular docking of PAT-409 with ATX protein. All compounds were selected for ATX inhibitory activity studies in vitro to extend the structure-activity relationship (SAR) study. To our delight, some compounds displayed preferable activity against ATX enzyme. Among them, compound G18 with a typical N-4-(hydroxyphenyl)acetamide hydrophilic "tail" showed the most excellent activity against ATX with IC50 values of 8.1 nM, exceeding that of PAT-409 (IC50 = 9.8 nM). Meanwhile, G18 was endowed with superior druglikeness properties, making it a promising therapeutic agent for the treatment of ATX-driven diseases.
引用
收藏
页数:12
相关论文
共 50 条
  • [21] Synthesis of novel bioactive pyrido[2,3-d]pyrimidine derivatives with potent cytotoxicity through apoptosis as PIM-1 kinase inhibitors
    Tantawy, Eman S.
    Nafie, Mohamed S.
    Morsy, Hesham A.
    El-Sayed, Hassan A.
    Moustafa, Ahmed H.
    Mohammed, Samar M.
    RSC ADVANCES, 2024, 14 (16) : 11098 - 11111
  • [22] New fluorinated diarylureas linked to pyrrolo[2,3-d]pyrimidine scaffold as VEGFR-2 inhibitors: Molecular docking and biological evaluation
    Adel, Mai
    Abouzid, Khaled A. M.
    BIOORGANIC CHEMISTRY, 2022, 127
  • [23] Discovery of thieno[2,3-d]pyrimidine-based derivatives as potent VEGFR-2 kinase inhibitors and anti-cancer agents
    El-Metwally, Souad A.
    Abou-El-Regal, Mohsen M.
    Eissa, Ibrahim H.
    Mehany, Ahmed B. M.
    Mahdy, Hazem A.
    Elkady, Hazem
    Elwan, Alaa
    Elkaeed, Eslam B.
    BIOORGANIC CHEMISTRY, 2021, 112
  • [24] Cytotoxic and Apoptotic Effects of Novel Pyrrolo[2,3-d]Pyrimidine Derivatives Containing Urea Moieties on Cancer Cell Lines
    Kilic-Kurt, Zuhal
    Bakar-Ates, Filiz
    Karakas, Bahriye
    Kutuk, Ozgur
    ANTI-CANCER AGENTS IN MEDICINAL CHEMISTRY, 2018, 18 (09) : 1303 - 1312
  • [25] Synthesis and Development of Highly Selective Pyrrolo[2,3-d]pyrimidine CSF1R Inhibitors Targeting the Autoinhibited Form
    Aarhus, Thomas Ihle
    Bjornstad, Frithjof
    Wolowczyk, Camilla
    Larsen, Kristin Uhlving
    Rognstad, Line
    Leithaug, Trygve
    Unger, Anke
    Habenberger, Peter
    Wolf, Alexander
    Bjorkoy, Geir
    Pridans, Clare
    Eickhoff, Jan
    Klebl, Bert
    Hoff, Bard H.
    Sundby, Eirik
    JOURNAL OF MEDICINAL CHEMISTRY, 2023, 66 (10) : 6959 - 6980
  • [26] Identification of new pyrrolo[2,3-d]pyrimidines as Src tyrosine kinase inhibitors in vitro active against Glioblastoma
    Musumeci, Francesca
    Fallacara, Anna Lucia
    Brullo, Chiara
    Grossi, Giancarlo
    Botta, Lorenzo
    Calandro, Pierpaolo
    Chiariello, Mario
    Kissova, Miroslava
    Crespan, Emmanuele
    Maga, Giovanni
    Schenone, Silvia
    EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2017, 127 : 369 - 378
  • [27] Diarylureas and Diarylamides with Pyrrolo[2,3-d]pyrimidine Scaffold as Broad-Spectrum Anticancer Agents
    El-Gamal, Mohammed Ibrahim
    Oh, Chang-Hyun
    CHEMICAL & PHARMACEUTICAL BULLETIN, 2014, 62 (01) : 25 - 34
  • [28] Structural optimizations on the 7H-pyrrolo[2,3-d]pyrimidine scaffold to develop highly selective, safe and potent JAK3 inhibitors for the treatment of Rheumatoid arthritis
    He, Linhong
    Zhang, Jie
    Ling, Zhen
    Zeng, Xianxia
    Yao, Hualiang
    Tang, Minghai
    Huang, Huaizheng
    Xie, Xin
    Qin, Tinsheng
    Feng, Xianjing
    Chen, Zhiquan
    Deng, Fengyuan
    Yue, Xiaoyang
    BIOORGANIC CHEMISTRY, 2024, 149
  • [29] Identification of a 7H-pyrrolo[2,3-d]pyrimidin derivatives as selective type II c-Met/Axl inhibitors with potent antitumor efficacy
    Qin, Songhui
    Xie, Lixin
    Tang, Minghai
    Ni, Hengfan
    Yang, Tao
    BIOORGANIC CHEMISTRY, 2025, 156
  • [30] Synthesis and anticancer evaluation of novel pyrrole-pyrido[2,3-d] pyrimidine-based compounds as thymidylate synthase inhibitors
    Kumar, Adarsh
    Singh, Ankit Kumar
    Singh, Harshwardhan
    Debbaraman, Tanushree
    Pathak, Prateek
    Naumovich, Vladislav
    Grishina, Maria
    Kumar, Pradeep
    JOURNAL OF MOLECULAR STRUCTURE, 2025, 1336