In silico investigation of artocarpin, cycloarotcarpin, artocarpanone, and cyanomaclurin for Dengue virus inhibitor DEN2 NS2B/NS3 serine protease

被引:1
|
作者
Frimayanti, Neni [1 ]
Septama, Abdi Wira [2 ]
Teruna, Hilwan Yuda [3 ]
Rahmi, Eldiza Puji [4 ]
机构
[1] Sekolah Tinggi Ilmu Farm Riau, Dept Pharm, Jln Kamboja Panam, Pekanbaru Riau 28293, Indonesia
[2] Natl Res & Innovat Agcy BRIN, Res Ctr Pharmaceut Ingredients & Tradit Med, Kawasan Sains & Teknol KST Soekarno, Cibinong 16911, Indonesia
[3] Univ Riau, Fac Math & Nat Sci, Dept Chem, Pekanbaru Riau, Indonesia
[4] Univ Pembangunan Nas Vet Jakarta, Pharm Program, Jakarta, Indonesia
来源
JOURNAL OF PHARMACY & PHARMACOGNOSY RESEARCH | 2025年 / 13卷 / 01期
关键词
Artocarpus heterophyllus; dengue; density functional theory; docking; pharmacophore; MOLECULAR DOCKING; IDENTIFICATION; 3D-QSAR;
D O I
10.56499/jppres24.2052_13.1.193
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Context: : Dengue virus (DENV) infection remains a significant global public health challenge that necessitates the development of novel therapeutic strategies. Aims: : To investigate compounds isolated from Artocarpus heterophyllus for their potential as inhibitors of the DENV NS2B/NS3 serine protease. Methods: : Initially, molecular docking was performed to predict the binding orientation of these flavonoid compounds with the serine protease enzyme. It was followed with pharmacophore, density functional theory (DFT), and ADMET-druglikeness. Results: : Results reveal promising interactions between cycloartocarpin and catalytic triad of the NS2B/NS3 protease. This promising candidate displayed the most stable conformation with the lowest gap energy during density functional theory simulation. Additionally, its ADMET profiles confirmed its drug-like properties. Conclusions: : Based on these findings, cycloartocarpin was selected as the reference compound for subsequent stages of drug design.
引用
收藏
页码:193 / 202
页数:10
相关论文
共 50 条
  • [21] Computer Aided Screening of Phytochemicals from Garcinia against the Dengue NS2B/NS3 Protease
    ul Qamar, Tahir
    Mumtaz, Arooj
    Ashfaq, Usman Ali
    Azhar, Samia
    Fatima, Tabeer
    Hassan, Muhammad
    Hussain, Syed Sajid
    Akram, Waheed
    Idrees, Sobia
    BIOINFORMATION, 2014, 10 (03) : 115 - 118
  • [22] Yellow fever virus NS2B/NS3 protease: Hydrolytic Properties and Substrate Specificity
    Kondo, Marcia Y.
    Oliveira, Lilian C. G.
    Okamoto, Debora N.
    de Araujo, Marina R. T.
    Duarte dos Santos, Claudia N.
    Juliano, Maria A.
    Juliano, Luiz
    Gouvea, Iuri E.
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2011, 407 (04) : 640 - 644
  • [23] Computational exploration of antiviral activity of phytochemicals against NS2B/NS3 proteases from dengue virus
    Rasool, Nouman
    Ashraf, Aisha
    Waseem, Muneeba
    Hussain, Waqar
    Mahmood, Sajid
    TURKISH JOURNAL OF BIOCHEMISTRY-TURK BIYOKIMYA DERGISI, 2019, 44 (03): : 261 - 277
  • [24] Increased activity of unlinked Zika virus NS2B/NS3 protease compared to linked Zika virus protease
    Kuiper, Benjamin D.
    Slater, Kristin
    Spellmon, Nicholas
    Holcomb, Joshua
    Medapureddy, Prasanna
    Muzzarelli, Kendall M.
    Yang, Zhe
    Ovadia, Reuben
    Amblard, Franck
    Kovari, Iulia A.
    Schinazi, Raymond F.
    Kovari, Ladislau C.
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2017, 492 (04) : 668 - 673
  • [25] The reaction mechanism of Zika virus NS2B/NS3 serine protease inhibition by dipeptidyl aldehyde: a QM/MM study
    Nutho, Bodee
    Mulholland, Adrian J.
    Rungrotmongkol, Thanyada
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2019, 21 (27) : 14945 - 14956
  • [26] Computer-aided identification of dengue virus NS2B/NS3 protease inhibitors: an integrated molecular modelling approach for screening of phytochemicals
    Mufti, Isra Umbreen
    Sufyan, Muhammad
    Shahid, Imran
    Alzahrani, Abdullah R.
    Shahzad, Naiyer
    M. Alanazi, Ibrahim Mufadhi
    Ibrahim, Ibrahim Abdel Aziz
    Rehman, Sidra
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2024, 42 (20) : 11052 - 11063
  • [27] Synthesis, X-ray crystallographic study, pharmacology and docking of hydrazinyl thiazolyl coumarins as dengue virus NS2B/NS3 serine protease inhibitors
    Yusufzai, Samina Khan
    Osman, Hasnah
    Khan, Mohammad Shaheen
    Abd Razik, Basma M.
    Mohamad, Suriyati
    Sulaiman, Othman
    Gansau, Jualang Azlan
    Johansah, Norhaniza
    Ezzat, Mohammed Oday
    Parumasivam, Thaigarajan
    Rosli, Mohd Mustaqim
    Razak, Ibrahim Abdul
    MEDICINAL CHEMISTRY RESEARCH, 2018, 27 (06) : 1647 - 1665
  • [28] Zika virus NS2B/NS3 proteinase: A new target for an old drug - Suramin a lead compound for NS2B/NS3 proteinase inhibition
    Coronado, Monika Aparecida
    Eberle, Raphael Josef
    Bleffert, Nicole
    Feuerstein, Sophie
    Olivier, Danilo Silva
    de Moraes, Fabio Rogerio
    Willbold, Dieter
    Arni, Raghuvir Krishnaswamy
    ANTIVIRAL RESEARCH, 2018, 160 : 118 - 125
  • [29] Synthesis, X-ray crystallographic study, pharmacology and docking of hydrazinyl thiazolyl coumarins as dengue virus NS2B/NS3 serine protease inhibitors
    Samina Khan Yusufzai
    Hasnah Osman
    Mohammad Shaheen Khan
    Basma M. Abd Razik
    Suriyati Mohamad
    Othman Sulaiman
    Jualang Azlan Gansau
    Norhaniza Johansah
    Mohammed Oday Ezzat
    Thaigarajan Parumasivam
    Mohd Mustaqim Rosli
    Ibrahim Abdul Razak
    Medicinal Chemistry Research, 2018, 27 : 1647 - 1665
  • [30] Computational Design of Dengue Type-2 NS2B/NS3 Protease Inhibitor: 2D/3D QSAR of Quinoline and Its Molecular Docking
    Hariono, Maywan
    Kamarulzaman, Ezatul E.
    Wahab, Habibah A.
    PROCEEDINGS OF THE 3RD INTERNATIONAL CONFERENCE ON COMPUTATION FOR SCIENCE AND TECHNOLOGY, 2015, 5 : 63 - 81