Bioinformatics approaches to multi-omics analysis of the potential of CDKN2A as a biomarker and therapeutic target for uterine corpus endometrial carcinoma

被引:0
作者
Ma, Liang [1 ]
Li, Yuling [2 ]
Wu, Jingxian [1 ,3 ,4 ]
Gao, Yanfei [2 ]
机构
[1] Chongqing Med Univ, Coll Basic Med, Dept Pathol, Chongqing 400000, Peoples R China
[2] Chongqing Med Univ, Coll Basic Med Sci, Biochem & Mol Biol, Chongqing 400000, Peoples R China
[3] Chongqing Med Univ, Mol Med Diagnost & Testing Ctr, Chongqing 400000, Peoples R China
[4] Chongqing Med Univ, Affiliated Hosp 1, Dept Pathol, Chongqing 400000, Peoples R China
来源
SCIENTIFIC REPORTS | 2025年 / 15卷 / 01期
关键词
CDKN2A; Uterine corpus endometrial carcinoma; CDKN2A expression; Somatic copy number alteration analysis; Immunotherapy; CANCER; GRADE; RISK;
D O I
10.1038/s41598-025-85364-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Uterine corpus endometrial carcinoma (UCEC) is a significant cause of cancer-related mortality among women worldwide. Prior research has demonstrated an association between cyclin-dependent kinase inhibitor 2 A (CDKN2A) and various tumors. As a member of the INK4 family, CDKN2A is involved in cell cycle regulation by controlling CDKs. In the present study, bioinformatics was used to analyze public datasets. The expression levels, signaling pathways, and copy number variations of CDKN2A in UCEC were explored, along with its immune cell subset associations. CDKN2A expression was found to be elevated in UCEC, particularly in the signaling pathways involved in cell proliferation and inflammation. Analysis of somatic copy number alterations in the TCGA (The Cancer Genome Atlas)-UCEC dataset revealed a connection between CDKN2A and drug metabolism in UCEC. Assessment of the relationship between CDKN2A and genes involved in immunotherapy for UCEC patients showed a negative correlation between CDKN2A and CD8+ T cell activity, as well as IL-2 and TP53. Collectively, these insights suggest that CDKN2A may be a potential biomarker for prognosis and treatment strategies in UCEC.
引用
收藏
页数:13
相关论文
共 46 条
  • [1] Gene Ontology: tool for the unification of biology
    Ashburner, M
    Ball, CA
    Blake, JA
    Botstein, D
    Butler, H
    Cherry, JM
    Davis, AP
    Dolinski, K
    Dwight, SS
    Eppig, JT
    Harris, MA
    Hill, DP
    Issel-Tarver, L
    Kasarskis, A
    Lewis, S
    Matese, JC
    Richardson, JE
    Ringwald, M
    Rubin, GM
    Sherlock, G
    [J]. NATURE GENETICS, 2000, 25 (01) : 25 - 29
  • [2] Uterine serous carcinoma
    Bogani, Giorgio
    Ray-Coquard, Isabelle
    Concin, Nicole
    Ngoi, Natalie Y. L.
    Morice, Philippe
    Enomoto, Takayuki
    Takehara, Kazuhiro
    Denys, Hannelore
    Nout, Remi A.
    Lorusso, Domenica
    Vaughan, Michelle M.
    Bini, Marta
    Takano, Masashi
    Provencher, Diane
    Indini, Alice
    Sagae, Satoru
    Wimberger, Pauline
    Poka, Robert
    Segev, Yakir
    Kim, Se Ik
    dos Reis, Francisco J. Candido
    Lopez, Salvatore
    Mariani, Andrea
    Leitao, Mario M., Jr.
    Raspagliesi, Francesco
    Panici, Pieluigi Benedetti
    Di Donato, Violante
    Muzii, Ludovico
    Colombo, Nicoletta
    Scambia, Giovanni
    Pignata, Sandro
    Monk, Bradley J.
    [J]. GYNECOLOGIC ONCOLOGY, 2021, 162 (01) : 226 - 234
  • [3] Interleukins in cancer: from biology to therapy
    Briukhovetska, Dania
    Dorr, Janina
    Endres, Stefan
    Libby, Peter
    Dinarello, Charles A.
    Kobold, Sebastian
    [J]. NATURE REVIEWS CANCER, 2021, 21 (08) : 481 - 499
  • [4] The Cancer Genome Atlas Pan-Cancer analysis project
    Weinstein, John N.
    Collisson, Eric A.
    Mills, Gordon B.
    Shaw, Kenna R. Mills
    Ozenberger, Brad A.
    Ellrott, Kyle
    Shmulevich, Ilya
    Sander, Chris
    Stuart, Joshua M.
    [J]. NATURE GENETICS, 2013, 45 (10) : 1113 - 1120
  • [5] UALCAN: An update to the integrated cancer data analysis platform
    Chandrashekar, Darshan Shimoga
    Karthikeyan, Santhosh Kumar
    Korla, Praveen Kumar
    Patel, Henalben
    Shovon, Ahmedur Rahman
    Athar, Mohammad
    Netto, George J.
    Qin, Zhaohui S.
    Kumar, Sidharth
    Manne, Upender
    Creighton, Chad J.
    Varambally, Sooryanarayana
    [J]. NEOPLASIA, 2022, 25 : 18 - 27
  • [6] Report of cancer incidence and mortality in China, 2010
    Chen, Wanqing
    Zheng, Rongshou
    Zhang, Siwei
    Zhao, Ping
    Zeng, Hongmei
    Zou, Xiaonong
    [J]. ANNALS OF TRANSLATIONAL MEDICINE, 2014, 2 (07)
  • [7] Applications and mechanisms of the cyclin-dependent kinase 4/6 inhibitor, PD-0332991, in solid tumors
    Chen, Wenjian
    Zhang, Wencheng
    Chen, Miaomiao
    Yang, Chao
    Fang, Ting
    Wang, Haifeng
    Reid, Lola M.
    He, Zhiying
    [J]. CELLULAR ONCOLOGY, 2022, 45 (06) : 1053 - 1071
  • [8] CDKN2A-mediated molecular subtypes characterize the hallmarks of tumor microenvironment and guide precision medicine in triple-negative breast cancer
    Cheng, Tianyi
    Wu, Yingyi
    Liu, Zhiyu
    Yu, Yi
    Sun, Shixue
    Guo, Min
    Sun, Baoqing
    Huang, Chen
    [J]. FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [9] ESGO/ESTRO/ESP guidelines for the management of patients with endometrial carcinoma
    Concin, Nicole
    Matias-Guiu, Xavier
    Vergote, Ignace
    Cibula, David
    Mirza, Mansoor Raza
    Marnitz, Simone
    Ledermann, Jonathan
    Bosse, Tjalling
    Chargari, Cyrus
    Fagotti, Anna
    Fotopoulou, Christina
    Gonzalez Martin, Antonio
    Lax, Sigurd
    Lorusso, Domenica
    Marth, Christian
    Morice, Philippe
    Nout, Remi A.
    O'Donnell, Dearbhaile
    Querleu, Denis
    Raspollini, Maria Rosaria
    Sehouli, Jalid
    Sturdza, Alina
    Taylor, Alexandra
    Westermann, Anneke
    Wimberger, Pauline
    Colombo, Nicoletta
    Planchamp, Francois
    Creutzberg, Carien L.
    [J]. INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER, 2021, 31 (01) : 12 - 39
  • [10] Crosbie E., 2022, Endometrial cancer, V399, P1412, DOI [10.1016/s0140-6736(22)00323-3, DOI 10.1016/S0140-6736(22)00323-3]