ANAgdb: a multi-omics and taxonomy database for ANA-grade

被引：0

作者：

Guo, Zhonglong ^{[1
]}

Luo, Shaoxuan ^{[1
]}

Wang, Qi ^{[1
]}

Yang, Yixiang ^{[1
]}

Bai, Yawen ^{[1
]}

Wei, Junrong ^{[1
]}

Wang, Dong ^{[3
]}

Duan, Yifan ^{[1
]}

Yang, Xiaozeng ^{[2
]}

Yang, Yong ^{[1
]}

机构：

[1] Nanjing Forestry Univ, Coll Life Sci, Coinnovat Ctr Sustainable Forestry Southern China, Nanjing 210037, Peoples R China

[2] Chinese Acad Sci, Inst Bot, State Key Lab Plant Divers & Specialty Crops, Beijing 100093, Peoples R China

[3] WeiRan Biotech, Beijing 100085, Peoples R China

来源：

BMC PLANT BIOLOGY | 2024年 / 24卷 / 01期

基金：

中国国家自然科学基金;

关键词：

ANA-grade; Multi-omics; Taxonomy; Database; GENOME; TRANSCRIPTOME; EVOLUTION;

D O I：

10.1186/s12870-024-05613-4

中图分类号：

Q94 [植物学];

学科分类号：

071001 ;

摘要：

BackgroundThe ANA-grade, encompassing early-diverging angiosperm lineages, Amborellales, Nymphaeales, and Austrobaileyales, represents a fundamental phase in the evolutionary history of flowering plants. Since the completion of key assembly of the Amborella genome, the continuous influx of omics data from the lineage underscores the need for a specialized database.ResultsHere, we introduce the ANA-grade Genome Database (ANAgdb, https://anagenome.cn/), which integrates multi-omics data including 11 genomes, 167 transcriptomes, and 10 miRNAomes, as well as extensive taxonomic details specific to the ANA-grade. Designed with an array of user-friendly tools, ANAgdb not only facilitates the effective storage, querying, and analysis of data but also enables the integration and dissemination of crucial genomic and taxonomic information.ConclusionBy integrating the comprehensive resources and tools, ANAgdb aims to significantly advance research in phylogenomics and taxonomic studies, providing a robust platform for researchers to explore the genetic and morphological diversities of these ancient plant lineages.

引用

页数：9

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