Identifying invasiveness to aid lung adenocarcinoma diagnosis using deep learning and pathomics

被引:1
作者
Du, Hai [1 ]
Wang, Xiulin [2 ,3 ]
Wang, Kaifeng [4 ]
Ai, Qi [5 ]
Shen, Jing [6 ]
Zhu, Ruiping [7 ]
Wu, Jianlin [6 ]
机构
[1] Ordos Cent Hosp, Dept Radiol, Ordos City, Peoples R China
[2] Dalian Med Univ, Affiliated Hosp 1, Stem Cell Clin Res Ctr, Dalian, Liaoning, Peoples R China
[3] Dalian Innovat Inst Stem Cell & Precis Med, Dalian, Liaoning, Peoples R China
[4] Fujian Med Univ, Fuzhou, Fujian, Peoples R China
[5] Dalian Univ, Affiliated Xinhua Hosp, Dept Radiol, Dalian, Liaoning, Peoples R China
[6] Dalian Univ, Affiliated Zhongshan Hosp, Dept Radiol, Dalian, Liaoning, Peoples R China
[7] Dalian Univ, Affiliated Zhongshan Hosp, Dept Pathol, Dalian, Liaoning, Peoples R China
基金
中国国家自然科学基金;
关键词
Deep learning; Machine learning; Pathomics; Invasiveness; Lung adenocarcinoma; CLASSIFICATION; CANCER; VARIABILITY;
D O I
10.1038/s41598-025-87094-5
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Most classification efforts for primary subtypes of lung adenocarcinoma (LUAD) have not yet been integrated into clinical practice. This study explores the feasibility of combining deep learning and pathomics to identify tumor invasiveness in LUAD patients, highlighting its potential clinical value in assisting junior and intermediate pathologists. We retrospectively analyzed whole slide image (WSI) data from 289 patients with surgically resected ground-glass nodules (GGNs). First, three ResNet deep learning models were used to identify tumor regions. Second, features from the best-performing model were extracted to build pathomics using machine learning classifiers. Third, the accuracy of pathomics in predicting tumor invasiveness was compared with junior and intermediate pathologists' diagnoses. Performance was evaluated using the area under receiver operator characteristic curve (AUC). On the test cohort, ResNet18 achieved the highest AUC (0.956) and sensitivity (0.832) in identifying tumor areas, with an accuracy of 0.904; Random Forest provided high accuracy and AUC values of 0.814 and 0.807 in assessing tumor invasiveness. Pathology assistance improved diagnostic accuracy for junior and intermediate pathologists, with AUC values increasing from 0.547 to 0.759 and 0.656 to 0.769. This study suggests that deep learning and pathomics can enhance diagnostic accuracy, offering valuable support to pathologists.
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页数:12
相关论文
共 31 条
[1]   QuPath: Open source software for digital pathology image analysis [J].
Bankhead, Peter ;
Loughrey, Maurice B. ;
Fernandez, Jose A. ;
Dombrowski, Yvonne ;
Mcart, Darragh G. ;
Dunne, Philip D. ;
McQuaid, Stephen ;
Gray, Ronan T. ;
Murray, Liam J. ;
Coleman, Helen G. ;
James, Jacqueline A. ;
Salto-Tellez, Manuel ;
Hamilton, Peter W. .
SCIENTIFIC REPORTS, 2017, 7
[2]   A color-based deep-learning approach for tissue slide lung cancer classification [J].
Bishnoi, Vidhi ;
Goel, Nidhi .
BIOMEDICAL SIGNAL PROCESSING AND CONTROL, 2023, 86
[3]   Development and interpretation of a pathomics-based model for the prediction of microsatellite instability in Colorectal Cancer [J].
Cao, Rui ;
Yang, Fan ;
Ma, Si-Cong ;
Liu, Li ;
Zhao, Yu ;
Li, Yan ;
Wu, De-Hua ;
Wang, Tongxin ;
Lu, Wei-Jia ;
Cai, Wei-Jing ;
Zhu, Hong-Bo ;
Guo, Xue-Jun ;
Lu, Yu-Wen ;
Kuang, Jun-Jie ;
Huan, Wen-Jing ;
Tang, Wei-Min ;
Huang, Kun ;
Huang, Junzhou ;
Yao, Jianhua ;
Dong, Zhong-Yi .
THERANOSTICS, 2020, 10 (24) :11080-11091
[4]   Pathomic Features Reveal Immune and Molecular Evolution From Lung Preneoplasia to Invasive Adenocarcinoma [J].
Chen, Pingjun ;
Rojas, Frank R. ;
Hu, Xin ;
Serrano, Alejandra ;
Zhu, Bo ;
Chen, Hong ;
Hong, Lingzhi ;
Bandyoyadhyay, Rukhmini ;
Aminu, Muhammad ;
Kalhor, Neda ;
Lee, J. Jack ;
El Hussein, Siba ;
Khoury, Joseph D. ;
Pass, Harvey I. ;
Moreira, Andre L. ;
Velcheti, Vamsidhar ;
Sterman, Daniel H. ;
Fukuoka, Junya ;
Tabata, Kazuhiro ;
Su, Dan ;
Ying, Lisha ;
Gibbons, Don L. ;
Heymach, John, V ;
Wistuba, Ignacio I. ;
Fujimoto, Junya ;
Soto, Luisa M. Solis ;
Zhang, Jianjun ;
Wu, Jia .
MODERN PATHOLOGY, 2023, 36 (12)
[5]   CT-Based Deep Learning Model for Invasiveness Classification and Micropapillary Pattern Prediction Within Lung Adenocarcinoma [J].
Ding, Hanlin ;
Xia, Wenjie ;
Zhang, Lei ;
Mao, Qixing ;
Cao, Bowen ;
Zhao, Yihang ;
Xu, Lin ;
Jiang, Feng ;
Dong, Gaochao .
FRONTIERS IN ONCOLOGY, 2020, 10
[6]   Artificial-intelligence-based computed tomography histogram analysis predicting tumor invasiveness of lung adenocarcinomas manifesting as radiological part-solid nodules [J].
Gao, Jian ;
Qi, Qingyi ;
Li, Hao ;
Wang, Zhenfan ;
Sun, Zewen ;
Cheng, Sida ;
Yu, Jie ;
Zeng, Yaqi ;
Hong, Nan ;
Wang, Dawei ;
Wang, Huiyang ;
Yang, Feng ;
Li, Xiao ;
Li, Yun .
FRONTIERS IN ONCOLOGY, 2023, 13
[7]   The Emergence of Pathomics [J].
Gupta, Rajarsi ;
Kurc, Tahsin ;
Sharma, Ashish ;
Almeida, Jonas S. ;
Saltz, Joel .
CURRENT PATHOBIOLOGY REPORTS, 2019, 7 (03) :73-84
[8]   Distinct Clinicopathologic Characteristics and Prognosis Based on the Presence of Ground Glass Opacity Component in Clinical Stage IA Lung Adenocarcinoma [J].
Hattori, Aritoshi ;
Hirayama, Shunki ;
Matsunaga, Takeshi ;
Hayashi, Takuo ;
Takamochi, Kazuya ;
Oh, Shiaki ;
Suzuki, Kenji .
JOURNAL OF THORACIC ONCOLOGY, 2019, 14 (02) :265-275
[9]   Deep Residual Learning for Image Recognition [J].
He, Kaiming ;
Zhang, Xiangyu ;
Ren, Shaoqing ;
Sun, Jian .
2016 IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR), 2016, :770-778
[10]   Diagnosis of lung adenocarcinoma in situ and minimally invasive adenocarcinoma from intraoperative frozen sections: an analysis of 136 cases [J].
He, Ping ;
Yao, Guangyu ;
Guan, Yubao ;
Lin, Yunen ;
He, Jianxing .
JOURNAL OF CLINICAL PATHOLOGY, 2016, 69 (12) :1076-1080