Next-generation sequencing in ophthalmology

被引:0
作者
Wolf, Julian [1 ,2 ,3 ]
Lange, Clemens [1 ,2 ,4 ]
Reinhard, Thomas [1 ,2 ]
Schlunck, Guenther [1 ,2 ]
机构
[1] Univ Klinikum Freiburg, Klin Augenheilkunde, Killianstr 5, D-79106 Freiburg, Germany
[2] Albert Ludwigs Univ Freiburg, Med Fak, Freiburg, Germany
[3] Stanford Univ, Byers Eye Inst, Sch Med, Palo Alto, CA USA
[4] Augenzentrum St Franziskus Hosp, Ophtha Lab, Munster, Germany
关键词
RNA sequencing; Transcriptome analysis; DNA sequencing; Genome; Macular degeneration;
D O I
10.1007/s00717-024-00580-5
中图分类号
R77 [眼科学];
学科分类号
100212 ;
摘要
New methods for basic research are finding their way into ophthalmology and expand the options for research, diagnostics and treatment. This article centers on the study of gene activity in cells and tissues by next-generation sequencing (NGS). Following a brief introduction to the basic principles of NGS, this article focuses on transcriptome analysis by RNA sequencing using examples from ophthalmology. The RNA sequencing provides a comprehensive and unbiased overview of gene activity in cells and tissues and thus forms an important foundation for generating new testable scientific hypotheses. It thus contributes to the in-depth characterization of pathological changes and supports the development of new diagnostic and therapeutic approaches.
引用
收藏
页码:260 / 270
页数:11
相关论文
共 50 条
  • [31] Isothermal amplification method for next-generation sequencing
    Ma, Zhaochun
    Lee, Raymond W.
    Li, Bin
    Kenney, Paul
    Wang, Yufang
    Erikson, Jonathan
    Goyal, Swati
    Lao, Kaiqin
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (35) : 14320 - 14323
  • [32] Next-generation sequencing technology in clinical virology
    Capobianchi, M. R.
    Giombini, E.
    Rozera, G.
    CLINICAL MICROBIOLOGY AND INFECTION, 2013, 19 (01) : 15 - 22
  • [33] Application of Next-Generation Sequencing in Plant Breeding
    Vlk, David
    Repkova, Jana
    CZECH JOURNAL OF GENETICS AND PLANT BREEDING, 2017, 53 (03) : 89 - 96
  • [34] Next-Generation Sequencing for Confronting Virus Pandemics
    Quer, Josep
    Colomer-Castell, Sergi
    Campos, Carolina
    Andres, Cristina
    Pinana, Maria
    Francesca Cortese, Maria
    Gonzalez-Sanchez, Alejandra
    Garcia-Cehic, Damir
    Ibanez, Marta
    Pumarola, Tomas
    Rodriguez-Frias, Francisco
    Anton, Andres
    Tabernero, David
    VIRUSES-BASEL, 2022, 14 (03):
  • [35] Genes, behavior and next-generation RNA sequencing
    Hitzemann, R.
    Bottomly, D.
    Darakjian, P.
    Walter, N.
    Iancu, O.
    Searles, R.
    Wilmot, B.
    McWeeney, S.
    GENES BRAIN AND BEHAVIOR, 2013, 12 (01) : 1 - 12
  • [36] Next-Generation Sequencing in Genetic Hearing Loss
    Yan, Denise
    Tekin, Mustafa
    Blanton, Susan H.
    Liu, Xue Zhong
    GENETIC TESTING AND MOLECULAR BIOMARKERS, 2013, 17 (08) : 581 - 587
  • [37] Fourth Generation of Next-Generation Sequencing Technologies: Promise and Consequences
    Ke, Rongqin
    Mignardi, Marco
    Hauling, Thomas
    Nilsson, Mats
    HUMAN MUTATION, 2016, 37 (12) : 1363 - 1367
  • [38] Toward knowing the whole human: next-generation sequencing for personalized medicine
    Toma, Ian
    St Laurent, Georges, III
    McCaffrey, Timothy A.
    PERSONALIZED MEDICINE, 2011, 8 (04) : 483 - 491
  • [39] Advances in clinical next-generation sequencing: target enrichment and sequencing technologies
    Ballester, Leomar Y.
    Luthra, Rajyalakshmi
    Kanagal-Shamanna, Rashmi
    Singh, Rajesh R.
    EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2016, 16 (03) : 357 - 372
  • [40] Human Leukocyte Antigen Typing by Next-Generation Sequencing
    Profaizer, Tracie
    Kumanovics, Attila
    CLINICS IN LABORATORY MEDICINE, 2018, 38 (04) : 565 - +