Identification of a 5-gene signature panel for the prediction of prostate cancer progression

被引:0
作者
Shen, Michelle [1 ]
Garcia-Marques, Fernando [2 ]
Muruganantham, Arvind [2 ]
Liu, Shiqin [1 ]
White, James Robert [3 ]
Bermudez, Abel [2 ]
Rice, Meghan A. [2 ]
Thompson, Kelsey [2 ]
Chen, Chun-Liang [4 ,5 ]
Hung, Chia-Nung [4 ]
Zhang, Zhao [4 ]
Huang, Tim H. [4 ]
Liss, Michael A. [6 ]
Pienta, Kenneth J. [7 ]
Pitteri, Sharon J. [2 ]
Stoyanova, Tanya [1 ,8 ]
机构
[1] Univ Calif Los Angeles, Dept Mol & Med Pharmacol, Los Angeles, CA 90095 USA
[2] Stanford Univ, Dept Radiol, Stanford, CA USA
[3] Resphera Biosci LLC, Baltimore, MD USA
[4] UT Hlth San Antonio, Dept Mol Med, San Antonio, TX USA
[5] UT Hlth San Antonio, Sch Nursing, San Antonio, TX USA
[6] UT Hlth San Antonio, Dept Urol, San Antonio, TX USA
[7] Johns Hopkins Sch Med, Brady Urol Inst, Baltimore, MD USA
[8] Univ Calif Los Angeles, Dept Urol, Los Angeles, CA 90095 USA
关键词
BINDING PROTEIN 4; DOWN-REGULATION; EXPRESSION; CELLS; TUMORIGENESIS; MUTATIONS; U2AF(65); AUTOPSY; PROMOTE; PATHWAY;
D O I
10.1038/s41416-024-02854-w
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
BackgroundDespite nearly 100% 5-year survival for localised prostate cancer, the survival rate for metastatic prostate cancer significantly declines to 32%. Thus, it is crucial to identify molecular indicators that reflect the progression from localised disease to metastatic prostate cancer.MethodsTo search for molecular indicators associated with prostate cancer metastasis, we performed proteomic analysis of rapid autopsy tissue samples from metastatic prostate cancer (N = 8) and localised prostate cancer (N = 2). Then, we utilised multiple independent, publicly available prostate cancer patient datasets to select candidates that also correlate with worse prostate cancer clinical prognosis.ResultsWe identified 154 proteins with increased expressions in metastases relative to localised prostate cancer through proteomic analysis. From the subset of these candidates that correlate with prostate cancer recurrence (N = 28) and shorter disease-free survival (N = 37), we identified a 5-gene signature panel with improved performance in predicting worse clinical prognosis relative to individual candidates.ConclusionsOur study presents a new 5-gene signature panel that is associated with worse clinical prognosis and is elevated in prostate cancer metastasis on both protein and mRNA levels. Our 5-gene signature panel represents a potential modality for the prediction of prostate cancer progression towards the onset of metastasis.
引用
收藏
页码:1748 / 1761
页数:14
相关论文
共 57 条
[1]  
American Cancer Society, 2023, SURVIVAL RATES PROST
[2]  
American Cancer Society, 2022, INITIAL TREATMENT PR
[3]   Grade Migration of Prostate Cancer in the United States During the Last Decade [J].
Borregales, Leonardo D. ;
DeMeo, Gina ;
Gu, Xiangmei ;
Cheng, Emily ;
Dudley, Vanessa ;
Schaeffer, Edward M. ;
Nagar, Himanshu ;
Carlsson, Sigrid ;
Vickers, Andrew ;
Hu, Jim C. .
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2022, 114 (07) :1012-1019
[4]   The Molecular Taxonomy of Primary Prostate Cancer [J].
Abeshouse, Adam ;
Ahn, Jaeil ;
Akbani, Rehan ;
Ally, Adrian ;
Amin, Samirkumar ;
Andry, Christopher D. ;
Annala, Matti ;
Aprikian, Armen ;
Armenia, Joshua ;
Arora, Arshi ;
Auman, J. Todd ;
Balasundaram, Miruna ;
Balu, Saianand ;
Barbieri, Christopher E. ;
Bauer, Thomas ;
Benz, Christopher C. ;
Bergeron, Alain ;
Beroukhim, Rameen ;
Berrios, Mario ;
Bivol, Adrian ;
Bodenheimer, Tom ;
Boice, Lori ;
Bootwalla, Moiz S. ;
dos Reis, Rodolfo Borges ;
Boutros, Paul C. ;
Bowen, Jay ;
Bowlby, Reanne ;
Boyd, Jeffrey ;
Bradley, Robert K. ;
Breggia, Anne ;
Brimo, Fadi ;
Bristow, Christopher A. ;
Brooks, Denise ;
Broom, Bradley M. ;
Bryce, Alan H. ;
Bubley, Glenn ;
Burks, Eric ;
Butterfield, Yaron S. N. ;
Button, Michael ;
Canes, David ;
Carlotti, Carlos G. ;
Carlsen, Rebecca ;
Carmel, Michel ;
Carroll, Peter R. ;
Carter, Scott L. ;
Cartun, Richard ;
Carver, Brett S. ;
Chan, June M. ;
Chang, Matthew T. ;
Chen, Yu .
CELL, 2015, 163 (04) :1011-1025
[5]   Gene expression profiles of prostate cancer reveal involvement of multiple molecular pathways in the metastatic process [J].
Chandran, Uma R. ;
Ma, Changqing ;
Dhir, Rajiv ;
Bisceglia, Michelle ;
Lyons-Weiler, Maureen ;
Liang, Wenjing ;
Michalopoulos, George ;
Becich, Michael ;
Monzon, Federico A. .
BMC CANCER, 2007, 7 (1)
[6]   Splicing inhibition of U2AF65 leads to alternative exon skipping [J].
Cho, Sunghee ;
Moon, Heegyum ;
Loh, Tiing Jen ;
Jang, Ha Na ;
Liu, Yongchao ;
Zhou, Jianhua ;
Ohn, Takbum ;
Zheng, Xuexiu ;
Shen, Haihong .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 112 (32) :9926-9931
[7]   RUVBL1-RUVBL2 AAA-ATPase: a versatile scaffold for multiple complexes and functions [J].
Dauden, Maria, I ;
Lopez-Perrote, Andres ;
Llorca, Oscar .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2021, 67 :78-85
[8]   TP53 Outperforms Other Androgen Receptor Biomarkers to Predict Abiraterone or Enzalutamide Outcome in Metastatic Castration-Resistant Prostate Cancer [J].
De Laere, Bram ;
Oeyen, Steffi ;
Mayrhofer, Markus ;
Whitington, Tom ;
van Dam, Pieter-Jan ;
Van Oyen, Peter ;
Ghysel, Christophe ;
Ampe, Jozef ;
Ost, Piet ;
Demey, Wim ;
Hoekx, Lucien ;
Schrijvers, Dirk ;
Brouwers, Barbara ;
Lybaert, Willem ;
Everaert, Els G. ;
De Maeseneer, Daan ;
Strijbos, Michiel ;
Bols, Alain ;
Fransis, Karen ;
Beije, Nick ;
de Kruijff, Inge E. ;
van Dam, Valerie ;
Brouwer, Anja ;
Goossens, Dirk ;
Heyrman, Lien ;
Van den Eynden, Gert G. ;
Rutten, Annemie ;
Del Favero, Jurgen ;
Rantalainen, Mattias ;
Rajan, Prabhakar ;
Sleijfer, Stefan ;
Ullen, Anders ;
Yachnin, Jeffrey ;
Gronberg, Henrik ;
Van Laere, Steven J. ;
Lindberg, Johan ;
Dirix, Luc Y. .
CLINICAL CANCER RESEARCH, 2019, 25 (06) :1766-1773
[9]   Metastatic castration-resistant prostate cancer reveals intrapatient similarity and interpatient heterogeneity of therapeutic kinase targets [J].
Drake, Justin M. ;
Graham, Nicholas A. ;
Lee, John K. ;
Stoyanova, Tanya ;
Faltermeier, Claire M. ;
Sud, Sudha ;
Titz, Bjoern ;
Huang, Jiaoti ;
Pienta, Kenneth J. ;
Graeber, Thomas G. ;
Witte, Owen N. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (49) :E4762-E4769
[10]   HDGF enhances VEGF-dependent angiogenesis and FGF-2 is a VEGF-independent angiogenic factor in non-small cell lung cancer [J].
Eguchi, Ryoji ;
Wakabayashi, Ichiro .
ONCOLOGY REPORTS, 2020, 44 (01) :14-28