Chromosome-level assembly of Prunus serrula Franch genome

被引:0
作者
Zuo, Hao [1 ,2 ,3 ,4 ]
Liu, Shengjun [2 ,3 ]
Tan, Lei [2 ,3 ]
Huang, Yue [2 ,3 ]
Li, Yuanrong [1 ,4 ]
Gesang, Pingcuo [1 ,4 ]
Hong, Ying [1 ,4 ]
Deng, Xiuxin [2 ,3 ]
Wang, Xia [2 ,3 ]
Xu, Qiang [2 ,3 ]
Jiao, Wen-Biao [2 ,3 ]
Zeng, Xiuli [1 ,4 ]
机构
[1] Minist Agr & Rural Affairs, Qinghai Tibet Plateau Fruit Trees Sci Observat Tes, Lhasa 850032, Xizang, Peoples R China
[2] Natl Key Lab Germplasm Innovat & Utilizat Hort Cro, Wuhan 430070, Hubei, Peoples R China
[3] Hubei Hongshan Lab, Wuhan 430070, Peoples R China
[4] Tibet Acad Agr & Anim Husb Sci, Inst Vegetables, Lhasa 850002, Xizang, Peoples R China
基金
芬兰科学院;
关键词
SWEET; TOOL;
D O I
10.1038/s41597-025-04810-6
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
P. serrula is widely distributed in Yunnan, Xizang, and Sichuan, and usually grows at high altitudes between 2,600 and 3,900 meters above sea level. In this study, we obtained a high-quality chromosome-level assembly genome of P. serrula using Illumina sequencing, Oxford Nanopore ultra-long sequencing, and Hi-C technology. The genome was 284.5 Mb in length, with a scaffold N50 of 32.4 Mb and 91.9% of the assembly anchored onto 8 pseudochromosomes. BUSCO completeness value of 98.5% demonstrated a high completed genome, and a total of 35,151 protein-coding genes and 47,340 transcripts were annotated. Overall, this genome delivers valuable genetic resources for further phylogenomic studies and provides insights into the genetic architectures underlying high-altitude adaptation.
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页数:5
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