π-Hole interactions of group III-VIII elements-bearing dimers and trimers: a comprehensive ab initio study

被引:0
作者
Ibrahim, Mahmoud A. A. [1 ,2 ]
Gendy, Karolen B. N. [1 ]
Saeed, Rehab R. A. [1 ]
Shehata, Mohammed N. I. [1 ]
Moussa, Nayra A. M. [1 ]
El-Tayeb, Mohamed A. [3 ]
Khan, Shahzeb [4 ]
Soliman, Mahmoud E. S. [5 ]
Shoeib, Tamer [6 ]
机构
[1] Minia Univ, Fac Sci, Chem Dept, Computat Chem Lab, Al Minya 61519, Egypt
[2] Univ KwaZulu Natal, Sch Hlth Sci, Westville Campus, ZA-4000 Durban, South Africa
[3] King Saud Univ, Coll Sci, Dept Bot & Microbiol, POB 2455, Riyadh 11451, Saudi Arabia
[4] Univ Bradford, Fac Life Sci, Ctr Pharmaceut Engn Sci, Sch Pharm & Med Sci, Bradford BD7 1DP, England
[5] Univ KwaZulu Natal, Sch Hlth Sci, Mol Biocomputat & Drug Design Lab, Westville Campus, ZA-4001 Durban, South Africa
[6] Amer Univ Cairo, Dept Chem, New Cairo 11835, Egypt
关键词
pi-Hole interactions; Trigonal planar geometry; QTAIM; NCI; FMOs; CORRELATED MOLECULAR CALCULATIONS; GAUSSIAN-BASIS SETS; NONCOVALENT INTERACTIONS; SIGMA-HOLE; BONDS; XE; CL; COMPLEXES; ALUMINUM; ORIGIN;
D O I
10.1007/s11696-024-03881-w
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
pi-Hole interactions of group III-VIII fourth- and fifth-row elements-bearing molecules in the trigonal planar geometry with NCH Lewis base were comparatively investigated in the fashion of dimeric and trimeric forms. On this basis, the TrF3/TF2O/ZO2F/YO3/XO2N/AeN2O center dot center dot center dot NCH and center dot center dot center dot(NCH)2 complexes were utilized and subjected to a wide variety of ab initio computations. Basically, the electrostatic potential findings announced that all studied molecules had observable pi-holes with variable sizes, which generally elevated according to the atomic size of the central atom (i.e., pi-hole donor). From the energetic outcomes, all the studied complexes had significant interaction energy with values ranging from - 6.84 to - 35.49 kcal/mol, where more negative values were noticed for the trimeric complexes than the dimeric counterparts. Among the investigated complexes, the most favorable interaction energies were dedicated to the triel-bearing complexes. Quantum theory of atoms in molecules analysis assured the partial covalent nature for the majority of the investigated interactions. The calculated electronic parameters and global indices of reactivity confirmed the occurrence of pi-hole interactions within the studied complexes. These annotations could be a cornerstone for upcoming crystal engineering and supramolecular chemistry experiments.
引用
收藏
页码:1657 / 1671
页数:15
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共 65 条
  • [1] Quantitative analysis of hydrogen and chalcogen bonds in two pyrimidine-5-carbonitrile derivatives, potential DHFR inhibitors: an integrated crystallographic and theoretical study
    Al-Wahaibi, Lamya H.
    Chakraborty, Kushumita
    Al-Shaalan, Nora H.
    Majeed, Mohamed Yehya Annavi Syed
    Blacque, Olivier
    Al-Mutairi, Aamal A.
    El-Emam, Ali A.
    Percino, M. Judith
    Thamotharan, Subbiah
    [J]. RSC ADVANCES, 2020, 10 (60) : 36806 - 36817
  • [2] Not Only Hydrogen Bonds: Other Noncovalent Interactions
    Alkorta, Ibon
    Elguero, Jose
    Frontera, Antonio
    [J]. CRYSTALS, 2020, 10 (03)
  • [3] Pnicogen Bonded Complexes of PO2X (X = F, Cl) with Nitrogen Bases
    Alkorta, Ibon
    Elguero, Jose
    Del Bene, Janet E.
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2013, 117 (40) : 10497 - 10503
  • [4] On the σ, π and δ hole interactions: a molecular orbital overview
    Angarov, V.
    Kozuch, S.
    [J]. NEW JOURNAL OF CHEMISTRY, 2018, 42 (02) : 1413 - 1422
  • [5] ATOMS IN MOLECULES
    BADER, RFW
    [J]. ACCOUNTS OF CHEMICAL RESEARCH, 1985, 18 (01) : 9 - 15
  • [6] π-Hole Interactions Involving Nitro Aromatic Ligands in Protein Structures
    Bauza, Antonio
    Frontera, Antonio
    Mooibroek, Tiddo Jonathan
    [J]. CHEMISTRY-A EUROPEAN JOURNAL, 2019, 25 (58) : 13436 - 13443
  • [7] π-Hole aerogen bonding interactions
    Bauza, Antonio
    Frontera, Antonio
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2015, 17 (38) : 24748 - 24753
  • [8] Directionality of π-holes in nitro compounds
    Bauza, Antonio
    Mooibroek, Tiddo J.
    Frontera, Antonio
    [J]. CHEMICAL COMMUNICATIONS, 2015, 51 (08) : 1491 - 1493
  • [9] A Combined Theoretical and Cambridge Structural Database Study of π-Hole Pnicogen Bonding Complexes between Electron Rich Molecules and Both Nitro Compounds and Inorganic Bromides (YO2Br, Y = N, P and As)
    Bauza, Antonio
    Ramis, Rafael
    Frontera, Antonio
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2014, 118 (15) : 2827 - 2834
  • [10] Halogen bonding in metal-organic-supramolecular networks
    Bertani, Roberta
    Sgarbossa, Paolo
    Venzo, Alfonso
    Lelj, Francesco
    Amati, Mario
    Resnati, Giuseppe
    Pilati, Tullio
    Metrangolo, Pierangelo
    Terraneo, Giancarlo
    [J]. COORDINATION CHEMISTRY REVIEWS, 2010, 254 (5-6) : 677 - 695