Effect of non-covalent interactions on the stability and structural properties of 2,4-dioxo-4-phenylbutanoic complex: a computational analysis

被引:2
作者
Mohammadi, Marziyeh [1 ]
Sharifi, Fatemeh [1 ]
Khanmohammadi, Azadeh [2 ]
机构
[1] Vali e Asr Univ Rafsanjan, Fac Sci, Dept Chem, Rafsanjan, Iran
[2] Payame Noor Univ PNU, Dept Chem, POB 19395-4697, Tehran, Iran
关键词
2,4-dioxo-4-phenylbutanoic acid; Cation-pi; Intramolecular hydrogen bond; AIM; NBO; DIVALENT METAL-CATIONS; 5-FLUOROURACIL ANTICANCER DRUG; AB-INITIO; ACID-DERIVATIVES; HYDROGEN-BOND; MOLECULAR-STRUCTURE; PI INTERACTIONS; DFT; NBO; MONO;
D O I
10.1007/s00894-024-06176-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
ContextThe 2,4-dioxo-4-phenylbutanoic acid (DPBA) is a subject of interest in pharmaceutical research, particularly in developing new drugs targeting viral and bacterial infections. Complexation with metal ions can improve the stability and solubility of organic compounds. The present study uses quantum chemical calculations to explore the structural and electronic results arising from the interaction between the metal cation (Fe2+) and the pi-system of DPBA in different solvents. For this purpose, the analyses of atoms in molecules (AIM) and natural bond orbital (NBO) are employed to comprehend the interaction features and the charge delocalization during the process of complexation. The results demonstrate that the strongest/weakest interactions are evident when the complex is situated in non-polar/polar solvents, respectively. In addition, the investigated complex exhibits two intramolecular hydrogen bonds (IMHBs) characterized by the O-H<middle dot><middle dot><middle dot>O motif. The results indicate that the HBs present in the complex fall within the category of weak to medium HBs. Moreover, the O-H<middle dot><middle dot><middle dot>O HBs are influenced by cation-pi interactions, which can increase/decrease their strength in polar/non-polar solvents. To enhance understanding of the interactions above, an examination is conducted on various physical properties including the energy gap, electronic chemical potential, chemical hardness, softness, and electrophilicity power.MethodAll calculations are conducted within the density functional theory (DFT) using the omega B97XD functional and 6-311 + + G(d,p) basis set. The computations are performed using the quantum chemistry package GAMESS, and the obtained results are visualized by employing the GaussView program.
引用
收藏
页数:17
相关论文
共 105 条
[81]   A Theoretical DFT Study on the Structural Parameters and Intramolecular Hydrogen-Bond Strength in Substituted (Z)-N-(Thionitrosomethylene)-thiohydroxylamine Systems [J].
Raissi, Heidar ;
Khanmohammadi, Azadeh ;
Mollania, Fariba .
BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN, 2013, 86 (11) :1261-1271
[82]   Ab initio and DFT studies on 1-(thionitrosomethylene) hydrazine: conformers, energies, and intramolecular hydrogen-bond strength [J].
Raissi, Heidar ;
Khanmohammadi, Azadeh ;
Yoosefian, Mehdi ;
Mollania, Fariba .
STRUCTURAL CHEMISTRY, 2013, 24 (04) :1121-1133
[83]  
Rama Swamy G., 2023, CHEM REV LETT, V6, P506
[84]  
Ravari F, 2015, PHYS CHEM RES, V3, P155, DOI 10.22036/pcr.2015.8445
[85]  
Ravari F., 2019, Org Chem Res, V6, P36
[86]   Restricted rotation in six-membered cyclic nitrosamine compounds: an ab initio and DFT study and NBO analysis [J].
Roohi, H ;
Deyhimi, F ;
Ebrahimi, A ;
Khanmohammady, A .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2005, 718 (1-3) :123-132
[87]  
Rzayev R., 2024, Chemical Review and Letters, V7, P479
[88]  
Sagheb M.J., 2023, Chem. Rev. Lett., V6, P308
[89]   GENERAL ATOMIC AND MOLECULAR ELECTRONIC-STRUCTURE SYSTEM [J].
SCHMIDT, MW ;
BALDRIDGE, KK ;
BOATZ, JA ;
ELBERT, ST ;
GORDON, MS ;
JENSEN, JH ;
KOSEKI, S ;
MATSUNAGA, N ;
NGUYEN, KA ;
SU, SJ ;
WINDUS, TL ;
DUPUIS, M ;
MONTGOMERY, JA .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1993, 14 (11) :1347-1363
[90]   From ligand to complexes:: Inhibition of human immunodeficiency virus type 1 integrase by β-diketo acid metal complexes [J].
Sechi, Mario ;
Bacchi, Alessia ;
Carcelli, Mauro ;
Compari, Carlotta ;
Duce, Elenia ;
Fisicaro, Emilia ;
Rogolino, Dominga ;
Gates, Paul ;
Derudas, Marco ;
Al-Mawsawi, Laith Q. ;
Neamati, Nouri .
JOURNAL OF MEDICINAL CHEMISTRY, 2006, 49 (14) :4248-4260