Physiological and molecular mechanisms of leaf response to high-temperature stress in high-temperature-resistant soybean varieties

被引:0
作者
Li, Jiajia [1 ]
Zhi, Xianguan [1 ]
Chen, Haoran [1 ]
Chen, Linying [1 ]
Lu, Yun [1 ]
Liao, Wei [1 ]
Tian, Zhuo [1 ]
Wu, Meiyan [1 ]
Shan, Yajing [1 ]
Wang, Heng [1 ]
Yan, Long [2 ]
Liu, Bingqiang [2 ]
Wang, Xiaobo [1 ]
机构
[1] Anhui Agr Univ, Sch Agron, Hefei, Peoples R China
[2] Hebei Acad Agr & Forestry Sci, Inst Cereal & Oil Crops, Natl Soybean Improvement Ctr Shijiazhuang Sub Ctr, Shijiazhuang 050035, Hebei, Peoples R China
来源
BMC GENOMICS | 2024年 / 25卷 / 01期
基金
中国国家自然科学基金;
关键词
Soybean; Leaves; High-temperature stress; RNA-seq; Molecular mechanism; Conserved domain analysis; HEAT-STRESS;
D O I
10.1186/s12864-024-10932-9
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
BackgroundWith increasing global limate warm, high temperature (HT) is one of limiting factors for soybean yield and quality. Exploring HT resistance-related functional genes and their corresponding molecular mechanisms is of great value. In our previous report, compared with HD14 (HT sensitive), JD21 is an HT-resistant variety, and further analysis of the transcriptome and proteome has revealed the HT tolerance mechanism of JD21 anthers. We found that compared with those of HD14 (28.72%), the leaves of JD21 also exhibited HT resistance, and the degree of leaf wilting in JD21 plants after HT stress treatment was 11.02%; however, the regulatory mechanism of the response of JD21 to HT stress is still unclear.ResultsIn this study, comparative transcriptome analysis of JD21 and HD14 soybean leaves after HT stress and field control plants was performed by RNA-seq analysis. The results showed that the number of upregulated differentially expressed genes (DEGs) in JD21 and HD14 was greater than the number of downregulated DEGs after HT stress, and the number of up- or down-regulated DEGs in JD21 was higher than those of HD14. Bioinformatics analysis revealed that many DEGs were involved in various molecular functions and metabolic pathways. QRT-PCR analysis verified that the gene expression pattern results determined via RNA-seq was reliable. In addition, through analysis of gene expression level and conserved domain, 18 key candidate genes related to the response of soybean leaves to HT stress were screened.ConclusionsThis study systematically revealed the regulation mechanism of soybean leaves molecular transcription level by RNA-seq, and several key candidate DEGs (transcription factor, HSPs, HSFs, GmCYP78A6, etc.) involved in the response to HT stress were identified based on the bioinformatics analysis. The results provided a theoretical basis for studying the response mechanism of soybean leaves to HT stress.
引用
收藏
页数:12
相关论文
共 43 条
  • [1] Genome-wide Analysis of bZIP Transcription Factors in wheat and Functional Characterization of a TabZIP under Abiotic Stress
    Agarwal, Preeti
    Baranwal, Vinay Kumar
    Khurana, Paramjit
    [J]. SCIENTIFIC REPORTS, 2019, 9 (1)
  • [2] Enhanced N-metabolites, ABA and IAA-conjugate in anthers instigate heat sensitivity in spring wheat
    Bheemanahalli, Raju
    Impa, Somayanda M.
    Krassovskaya, Inga
    Vennapusa, Amaranatha R.
    Gill, Kulvinder S.
    Obata, Toshihiro
    Jagadish, S. V. Krishna
    [J]. PHYSIOLOGIA PLANTARUM, 2020, 169 (04) : 501 - 514
  • [3] A β-ketoacyl carrier protein reductase confers heat tolerance via the regulation of fatty acid biosynthesis and stress signaling in rice
    Chen, Fei
    Dong, Guojun
    Wang, Fang
    Shi, Yingqi
    Zhu, Jiayu
    Zhang, Yanli
    Ruan, Banpu
    Wu, Yepin
    Feng, Xue
    Zhao, Chenchen
    Yong, Miing T.
    Holford, Paul
    Zeng, Dali
    Qian, Qian
    Wu, Limin
    Chen, Zhong-Hua
    Yu, Yanchun
    [J]. NEW PHYTOLOGIST, 2021, 232 (02) : 655 - 672
  • [4] Genome-wide identification of MAPK cascade genes reveals the GhMAP3K14-GhMKK11-GhMPK31 pathway is involved in the drought response in cotton
    Chen, Lin
    Sun, Heng
    Wang, Fengjiao
    Yue, Dandan
    Shen, Xiankun
    Sun, Weinan
    Zhang, Xianlong
    Yang, Xiyan
    [J]. PLANT MOLECULAR BIOLOGY, 2020, 103 (1-2) : 211 - 223
  • [5] The WRKY10-VQ8 module safely and effectively regulates rice thermotolerance
    Chen, Sique
    Cao, Hongrui
    Huang, Baolin
    Zheng, Xiujuan
    Liang, Kangjing
    Wang, Guo-Liang
    Sun, Xinli
    [J]. PLANT CELL AND ENVIRONMENT, 2022, 45 (07) : 2126 - 2144
  • [6] ABFs, a family of ABA-responsive element binding factors
    Choi, HI
    Hong, JH
    Ha, JO
    Kang, JY
    Kim, SY
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (03) : 1723 - 1730
  • [7] Activation tagging identifies Arabidopsis transcription factor AtMYB68 for heat and drought tolerance at yield determining reproductive stages
    Deng, Mingde
    Wang, Yang
    Kuzma, Monika
    Chalifoux, Maryse
    Tremblay, Linda
    Yang, Shujun
    Ying, Jifeng
    Sample, Angela
    Wang, Hung-Mei
    Griffiths, Rebecca
    Uchacz, Tina
    Tang, Xurong
    Tian, Gang
    Joslin, Katelyn
    Dennis, David
    McCourt, Peter
    Huang, Yafan
    Wan, Jiangxin
    [J]. PLANT JOURNAL, 2020, 104 (06) : 1535 - 1550
  • [8] Comparative Transcriptomics Analysis and Functional Study Reveal Important Role of High-Temperature Stress Response Gene GmHSFA2 During Flower Bud Development of CMS-Based F1 in Soybean
    Ding, Xianlong
    Guo, Qingling
    Li, Qiang
    Gai, Junyi
    Yang, Shouping
    [J]. FRONTIERS IN PLANT SCIENCE, 2020, 11
  • [9] High temperature promotes auxin-mediated hypocotyl elongation in Arabidopsis
    Gray, WM
    Östin, A
    Sandberg, G
    Romano, CP
    Estelle, M
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (12) : 7197 - 7202
  • [10] Transcriptome Analysis Reveals the Dynamic and Rapid Transcriptional Reprogramming Involved in Heat Stress and Identification of Heat Response Genes in Rice
    He, Yonggang
    Guan, Huimin
    Li, Bo
    Zhang, Shuo
    Xu, Yanhao
    Yao, Yan
    Yang, Xiaolong
    Zha, Zhongping
    Guo, Ying
    Jiao, Chunhai
    Cai, Haiya
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (19)