Proteome-wide mendelian randomization identifies causal plasma proteins in interstitial lung disease

被引:0
作者
Yu, Kunrong [1 ]
Li, Wanying [1 ]
Long, Wenjie [2 ]
Li, Yijia [1 ]
Li, Yanting [1 ]
Liao, Huili [2 ]
Liu, Jianhong [2 ]
机构
[1] Guangzhou Univ Chinese Med, Guangzhou 510000, Peoples R China
[2] Guangzhou Univ Chinese Med, Baiyun Hosp, Affiliated Hosp 1, Guangzhou 510000, Peoples R China
关键词
Interstitial lung disease; Subtype; Protein; Mendelian randomization; Biomarker; Drug target; IDIOPATHIC PULMONARY-FIBROSIS; MESENCHYMAL TRANSITION; EXPRESSION; FAMILY; ASSOCIATIONS; BETA;
D O I
10.1038/s41598-025-85338-y
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Interstitial lung disease (ILD) has shown limited treatment advancements, with minimal exploration of circulating protein biomarkers causally linked to ILD and its subtypes beyond idiopathic pulmonary fibrosis (IPF). In this study, we aimed to identify potential drug targets and circulating protein biomarkers for ILD and its subtypes. We utilized the most recent large-scale plasma protein quantitative trait loci (pQTL) data detected from the antibody-based method and ILD and its subtypes' GWAS data from the updated FinnGen database for Mendelian randomization analysis. To enhance the reliability of causal associations, we conducted external validation and sensitivity analyses, including Bayesian colocalization and bidirectional Mendelian randomization analysis. Our study identified eight plasma proteins genetically associated with ILD or its subtypes. Among these, three proteins-CDH15 (Cadherin-15), LTBR (Lymphotoxin-beta receptor), and ADAM15 (A disintegrin and metalloproteinase 15)-emerged as priority biomarkers and potential therapeutic targets, demonstrating more reliable associations by passing a series of sensitivity analyses compared to the others. Based on these findings, we propose for the first time that CDH15, ADAM15, and LTBR hold promise as novel potential circulating protein biomarkers and therapeutic targets for the diagnosis and treatment of ILD, IPF, and sarcoidosis, respectively, especially ADAM15, and these findings have the potential to provide new perspectives for advancing the research on the heterogeneity of ILD.
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页数:13
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共 74 条
[1]   Expression of lymphotoxin-beta (LT-β) in chronic inflammatory conditions [J].
Agyekum, S ;
Church, A ;
Sohail, M ;
Krausz, T ;
Van Noorden, S ;
Polak, J ;
Cohen, J .
JOURNAL OF PATHOLOGY, 2003, 199 (01) :115-121
[2]   Interstitial lung disease: a review of classification, etiology, epidemiology, clinical diagnosis, pharmacological and non-pharmacological treatment [J].
Althobiani, Malik A. ;
Russell, Anne-Marie ;
Jacob, Joseph ;
Ranjan, Yatharth ;
Folarin, Amos A. ;
Hurst, John R. ;
Porter, Joanna C. .
FRONTIERS IN MEDICINE, 2024, 11
[3]   Abundant Genetic Overlap between Blood Lipids and Immune-Mediated Diseases Indicates Shared Molecular Genetic Mechanisms [J].
Andreassen, Ole A. ;
Desikan, Rahul S. ;
Wang, Yunpeng ;
Thompson, Wesley K. ;
Schork, Andrew J. ;
Zuber, Verena ;
Doncheva, Nadezhda T. ;
Ellinghaus, Eva ;
Albrecht, Mario ;
Mattingsdal, Morten ;
Franke, Andre ;
Lie, Benedicte A. ;
Mills, Ian ;
Aukrust, Pal ;
McEvoy, Linda K. ;
Djurovic, Srdjan ;
Karlsen, Tom H. ;
Dale, Anders M. .
PLOS ONE, 2015, 10 (04)
[4]   Prevalence of hypothyroidism and Graves disease in sarcoidosis [J].
Antonelli, Alessandro ;
Fazzi, Piera ;
Fallahi, Poupak ;
Ferrari, Silvia Martina ;
Ferrannini, Ele .
CHEST, 2006, 130 (02) :526-532
[5]   Lung fibrosis in sarcoidosis. Is there a place for antifibrotics? [J].
Baczek, Karol ;
Piotrowski, Wojciech Jerzy .
FRONTIERS IN PHARMACOLOGY, 2024, 15
[6]   SRC and TKS5 mediated podosome formation in fibroblasts promotes extracellular matrix invasion and pulmonary fibrosis [J].
Barbayianni, Ilianna ;
Kanellopoulou, Paraskevi ;
Fanidis, Dionysios ;
Nastos, Dimitris ;
Ntouskou, Eleftheria-Dimitra ;
Galaris, Apostolos ;
Harokopos, Vaggelis ;
Hatzis, Pantelis ;
Tsitoura, Eliza ;
Homer, Robert ;
Kaminski, Naftali ;
Antoniou, Katerina M. ;
Crestani, Bruno ;
Tzouvelekis, Argyrios ;
Aidinis, Vassilis .
NATURE COMMUNICATIONS, 2023, 14 (01)
[7]   Diagnosis and Treatment of Pulmonary Sarcoidosis A Review [J].
Belperio, John A. ;
Shaikh, Faisal ;
Abtin, Fereidoun G. ;
Fishbein, Michael C. ;
Weigt, S. Samuel ;
Saggar, Rajan ;
Lynch, Joseph P., III .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2022, 327 (09) :856-867
[8]   Tyrosine kinase signaling in fibrotic disorders Translation of basic research to human disease [J].
Beyer, Christian ;
Distler, Joerg H. W. .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE, 2013, 1832 (07) :897-904
[9]   FOXF1 Inhibits Pulmonary Fibrosis by Preventing CDH2-CDH11 Cadherin Switch in Myofibroblasts [J].
Black, Markaisa ;
Milewski, David ;
Le, Tien ;
Ren, Xiaomeng ;
Xu, Yan ;
Kalinichenko, Vladimir V. ;
Kalin, Tanya V. .
CELL REPORTS, 2018, 23 (02) :442-458
[10]   ADAM15 Adds to Apoptosis Resistance of Synovial Fibroblasts by Modulating Focal Adhesion Kinase Signaling [J].
Boehm, Beate B. ;
Freund, Isabell ;
Krause, Kristin ;
Kinne, Raimund W. ;
Burkhardt, Harald .
ARTHRITIS AND RHEUMATISM, 2013, 65 (11) :2826-2834