Developing a prototype for federated analysis to enhance privacy and enable trustworthy access to COVID-19 research data

被引:1
作者
Oskoui, Solmaz Eradat [1 ]
Retford, Matthew [2 ]
Forde, Eoghan [1 ]
Barnes, Rodrigo [1 ]
Hunter, Karen J. [2 ]
Wozencraft, Anne [2 ]
Thompson, Simon [3 ]
Orton, Chris [3 ]
Ford, David [3 ]
Heys, Sharon [3 ]
Kennedy, Julie [3 ]
Mcnerney, Cynthia [3 ]
Peng, Jeffrey [3 ]
Ghanbariadolat, Hamed [3 ]
Rees, Sarah [3 ]
Mulholland, Rachel H. [4 ]
Sheikh, Aziz [4 ]
Burgner, David [5 ,6 ]
Brockway, Meredith [7 ,8 ]
Azad, Meghan B. [9 ,10 ]
Rodriguez, Natalie [9 ,10 ]
Zoega, Helga [11 ]
Stock, Sarah J. [4 ]
Calvert, Clara [4 ,12 ]
Miller, Jessica E. [5 ]
Fiorentino, Nicole [9 ]
Racine, Amy [13 ]
Haggstrom, Jonas [13 ]
Postlethwaite, Neil [2 ]
机构
[1] Aridhia Informat, Glasgow, Scotland
[2] Hlth Data Res UK HDR UK, London, England
[3] Swansea Univ, Med Sch, Swansea, Wales
[4] Univ Edinburgh, Usher Inst, Edinburgh, Scotland
[5] Royal Childrens Hosp, Murdoch Childrens Res Inst, Infect Immun & Global Hlth Theme, Parkville, Vic, Australia
[6] Univ Melbourne, Dept Paediat, Parkville, Vic, Australia
[7] Univ Calgary, Fac Nursing, Calgary, AB, Canada
[8] Alberta Childrens Hosp Res Inst, Calgary, AB, Canada
[9] UNIV MANITOBA, Pediat & Child Hlth, WINNIPEG, MB, Canada
[10] Childrens Hosp Res Inst Manitoba, Winnipeg, MB, Canada
[11] Univ Iceland, Fac Med, Ctr Publ Hlth Sci, Reykjavik, Iceland
[12] London Sch Hyg & Trop Med, Dept Populat Hlth, London, England
[13] Cytel, Cambridge, MA USA
基金
英国惠康基金;
关键词
Federated Networks; Federated Analytics; COVID-19; Health Data Research; Privacy-Preserving; Secondary Data; Data Re-use;
D O I
10.1016/j.ijmedinf.2024.105708
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Background: The use of federated networks can reduce the risk of disclosure for sensitive datasets by removing the requirement to physically transfer data. Federated networks support federated analytics, a type of privacy- enhancing technology, enabling trustworthy data analysis without the movement of source data. Objectives: To set out the methodology used by the International COVID-19 Data Alliance (ICODA) and its partners, the Secure Anonymised Information Linkage (SAIL) Databank and Aridhia Informatics in piloting a federated network infrastructure and consequently testing federated analytics using test data provided from an ICODA project, the International Perinatal Outcome in the Pandemic (iPOP) Study. To share the challenges and benefits of using a federated network infrastructure to enable trustworthy analysis of health-related data from multiple countries and sources. Results: This project successfully developed a federated network between the SAIL Databank and the ICODA Workbench and piloted the use of federated analysis using aggregate-level model outputs as test data from the iPOP Study, a one-year, multi-country COVID-19 research project. This integration is a first step in implementing the necessary technical, governance and user experiences for future research studies to build upon, including those using individual-level datasets from multiple data nodes. Conclusions: Creating federated networks requires extensive investment from a data governance, technology, training, resources, timing and funding perspective. For future initiatives, the establishment of a federated network should be built into medium to long term plans to provide researchers with a secure and robust data analysis platform to perform joint multi-site collaboration. Federated networks can unlock the enormous potential of national and international health datasets through enabling collaborative research that addresses critical public health challenges, whilst maintaining privacy and trustworthiness by preventing direct access to the source data.
引用
收藏
页数:13
相关论文
共 62 条
[41]  
Giles DT, 2023, Zenodo, DOI [10.5281/zenodo.10055354, DOI 10.5281/ZENODO.10055354]
[42]  
Global Alliance for Genomics and Health (GA4GH)', about us
[43]   Federated Networks for Distributed Analysis of Health Data [J].
Hallock, Harry ;
Marshall, Serena Elizabeth ;
't Hoen, Peter A. C. ;
Nygard, Jan F. ;
Hoorne, Bert ;
Fox, Cameron ;
Alagaratnam, Sharmini .
FRONTIERS IN PUBLIC HEALTH, 2021, 9
[44]   Infrastructuring an organizational node for a federated research and data network: A case study from a sociotechnical perspective [J].
Harris, Marcelline R. ;
Ferguson, Lisa A. ;
Luo, Airong .
JOURNAL OF CLINICAL AND TRANSLATIONAL SCIENCE, 2021, 5 (01)
[45]  
Health Data Research Gateway, about us
[46]  
Health Data Research United Kingdom (HDR UK), ABOUT US
[47]   A Hybrid Architecture (CO-CONNECT) to Facilitate Rapid Discovery and Access to Data Across the United Kingdom in Response to the COVID-19 Pandemic: Development Study [J].
Jefferson, Emily ;
Cole, Christian ;
Mumtaz, Shahzad ;
Cox, Samuel ;
Giles, Thomas Charles ;
Adejumo, Sam ;
Urwin, Esmond ;
Lea, Daniel ;
Macdonald, Calum ;
Best, Joseph ;
Masood, Erum ;
Milligan, Gordon ;
Johnston, Jenny ;
Horban, Scott ;
Birced, Ipek ;
Hall, Christopher ;
Jackson, Aaron S. ;
Collins, Clare ;
Rising, Sam ;
Dodsley, Charlotte ;
Hampton, Jill ;
Hadfield, Andrew ;
Santos, Roberto ;
Tarr, Simon ;
Panagi, Vasiliki ;
Lavagna, Joseph ;
Jackson, Tracy ;
Chuter, Antony ;
Beggs, Jillian ;
Martinez-Queipo, Magdalena ;
Ward, Helen ;
von Ziegenweidt, Julie ;
Burns, Frances ;
Martin, Joanne ;
Sebire, Neil ;
Morris, Carole ;
Bradley, Declan ;
Baxter, Rob ;
Ahonen-Bishopp, Anni ;
Smith, Paul ;
Shoemark, Amelia ;
Valdes, Ana M. ;
Ollivere, Benjamin ;
Manisty, Charlotte ;
Eyre, David ;
Gallant, Stephanie ;
Joy, George ;
McAuley, Andrew ;
Connell, David ;
Northstone, Kate .
JOURNAL OF MEDICAL INTERNET RESEARCH, 2022, 24 (12)
[48]  
Jones K H, 2019, Int J Popul Data Sci, V4, P1134, DOI 10.23889/ijpds.v4i2.1134
[49]   A global federated real-world data and analytics platform for research [J].
Palchuk, Matvey B. ;
London, Jack W. ;
Perez-Rey, David ;
Drebert, Zuzanna J. ;
Winer-Jones, Jessamine P. ;
Thompson, Courtney N. ;
Esposito, John ;
Claerhout, Brecht .
JAMIA OPEN, 2023, 6 (02)
[50]   COVID-19 Highlights a Critical Need for Efficient Health Information Systems for Managing Epidemics of Emerging Infectious Diseases [J].
Pooransingh, Shalini ;
Abdullah, Raisa ;
Battersby, Stephanie ;
Kercheval, Ramoutar .
FRONTIERS IN PUBLIC HEALTH, 2021, 9