The expression of RBPJ and its potential role in rheumatoid arthritis

被引:0
作者
Chen, Shuaishuai [1 ,2 ]
Zhao, Weibo [3 ]
Du, Juping [1 ,2 ]
Chen, Suyun [1 ,2 ]
Li, Jun [1 ,2 ]
Shen, Bo [1 ,2 ]
Zhou, Yuanlin [4 ]
Chen, Shiyong [1 ,2 ]
机构
[1] Wenzhou Med Univ, Taizhou Hosp Zhejiang Prov, Dept Clin Lab, 150 Ximen St Linhai City, Linhai 317000, Peoples R China
[2] Key Lab Syst Med & Precis Diag & Treatment Taizhou, Luqiao, Peoples R China
[3] Wenzhou Med Univ, Taizhou Hosp Zhejiang Prov, Dept Orthoped, Linhai, Peoples R China
[4] Wenzhou Med Univ, Taizhou Hosp Zhejiang Prov, Dept Neurol, 150 Ximen St Linhai City, Linhai 317000, Peoples R China
来源
BMC GENOMICS | 2024年 / 25卷 / 01期
关键词
Rheumatoid arthritis; DAS28; score; RBPJ; Gene expression Omnibus; T cell differentiation; NOTCH; INNATE;
D O I
10.1186/s12864-024-10804-2
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
BackgroundRecombination signal-binding protein for immunoglobulin kappa J region (RBPJ) is a transcriptional regulator that plays an important role in maintaining immune homeostasis. This study aimed to estimate the expression of RBPJ in rheumatoid arthritis (RA) patients and investigate its relationship with RA.MethodsA total of 83 newly diagnosed RA patients and 70 healthy controls were included. mRNA was extracted from peripheral blood mononuclear cells (PBMCs), and the expression of RBPJ was detected using quantitative real-time PCR (qRT-PCR). An RA dataset (GSE89408) was obtained from the Gene Expression Omnibus (GEO) database, and RA synovial tissues were divided into two groups. The differentially expressed genes (DEGs) were selected with the "DESeq2" R package.ResultsRBPJ expression was lower in RA patients than in health controls and was negatively correlated with the DAS28 score, C-reactive protein (CRP) level and erythrocyte sedimentation rate (ESR). RA synovial tissues from GSE89408 were classified into RBPJ-low (<= 25%) and RBPJ-high (>= 75%) groups according to RBPJ expression, and 562 DEGs were identified. Gene Ontology (GO) enrichment analyses revealed that the DEGs significantly affected the regulation of T cell activation and lymphocyte/mononuclear cell differentiation. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that the most enriched pathways of DEGs were the T cell receptor signaling pathway, Th1/2 and Th17 cell differentiation, the PI3K - Akt signaling pathway and cytokine-cytokine receptor interaction. CytoHubba Plugin revealed that most of the top 10 genes were involved in osteoclast differentiation, the T cell receptor signaling pathway and cytokine-cytokine receptor interaction.ConclusionsRBPJ expression was significantly lower in RA patients and negatively correlated with disease activity. GEO dataset analysis demonstrated that RBPJ may be involved in osteoclast differentiation, T cell activation and differentiation, and the T cell receptor signaling pathway. Our research may contribute to understanding the potential mechanisms by which RBPJ regulates T cell differentiation and cytokine-cytokine receptor interaction in RA patients.
引用
收藏
页数:14
相关论文
共 56 条
  • [11] Rbpj expression in regulatory T cells is critical for restraining TH2 responses
    Delacher, Michael
    Schmidl, Christian
    Herzig, Yonatan
    Breloer, Minka
    Hartmann, Wiebke
    Brunk, Fabian
    Kaegebein, Danny
    Traeger, Ulrike
    Hofer, Ann-Cathrin
    Bittner, Sebastian
    Weichenhan, Dieter
    Imbusch, Charles D.
    Hotz-Wagenblatt, Agnes
    Hielscher, Thomas
    Breiling, Achim
    Federico, Giuseppina
    Groene, Hermann-Josef
    Schmid, Roland M.
    Rehli, Michael
    Abramson, Jakub
    Feuerer, Markus
    [J]. NATURE COMMUNICATIONS, 2019, 10 (1)
  • [12] The role of Notch signaling pathway in metabolic bone diseases
    Gao, Yongguang
    Fu, Zhanda
    Guan, Junxia
    Liu, Xinhua
    Zhang, Qing
    [J]. BIOCHEMICAL PHARMACOLOGY, 2023, 207
  • [13] Functional genomics atlas of synovial fibroblasts defining rheumatoid arthritis heritability
    Ge, Xiangyu
    Frank-Bertoncelj, Mojca
    Klein, Kerstin
    McGovern, Amanda
    Kuret, Tadeja
    Houtman, Miranda
    Burja, Blaz
    Micheroli, Raphael
    Shi, Chenfu
    Marks, Miriam
    Filer, Andrew
    Buckley, Christopher D.
    Orozco, Gisela
    Distler, Oliver
    Morris, Andrew P.
    Martin, Paul
    Eyre, Stephen
    Ospelt, Caroline
    [J]. GENOME BIOLOGY, 2021, 22 (01)
  • [14] Immunochip Identifies Novel, and Replicates Known, Genetic Risk Loci for Rheumatoid Arthritis in Black South Africans
    Govind, Nimmisha
    Choudhury, Ananyo
    Hodkinson, Bridget
    Ickinger, Claudia
    Frost, Jacqueline
    Lee, Annette
    Gregersen, Peter K.
    Reynolds, Richard J.
    Bridges, S. Louis, Jr.
    Hazelhurst, Scott
    Ramsay, Michele
    Tikly, Mohammed
    [J]. MOLECULAR MEDICINE, 2014, 20 : 341 - 349
  • [15] CCL21/CCR7 axis as a therapeutic target for autoimmune diseases
    Han, Le
    Zhang, Lingling
    [J]. INTERNATIONAL IMMUNOPHARMACOLOGY, 2023, 121
  • [16] RBPJ Mutations Identified in Two Families Affected by Adams-Oliver Syndrome
    Hassed, Susan J.
    Wiley, Graham B.
    Wang, Shaofeng
    Lee, Ji-Yun
    Li, Shibo
    Xu, Weihong
    Zhao, Zhizhuang J.
    Mulvihill, John J.
    Robertson, James
    Warner, James
    Gaffney, Patrick M.
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2012, 91 (02) : 391 - 395
  • [17] Regulatory network mediated by RBP-J/NFATc1-miR182 controls inflammatory bone resorption
    Inoue, Kazuki
    Hu, Xiaoyu
    Zhao, Baohong
    [J]. FASEB JOURNAL, 2020, 34 (02) : 2392 - 2407
  • [18] The colonic macrophage transcription factor RBP-J orchestrates intestinal immunity against bacterial pathogens
    Kang, Lan
    Zhang, Xiang
    Ji, Liangliang
    Kou, Tiantian
    Smith, Sinead M.
    Zhao, Baohong
    Guo, Xiaohuan
    Pineda-Torra, Ines
    Wu, Li
    Hu, Xiaoyu
    [J]. JOURNAL OF EXPERIMENTAL MEDICINE, 2020, 217 (04)
  • [19] Profiling and targeting connective tissue remodeling in autoimmunity - A novel paradigm for diagnosing and treating chronic diseases
    Karsdal, Morten Asser
    Kraus, Virginia Byers
    Shevell, Diane
    Bay-Jensen, Anne Christine
    Schattenberg, Joern
    Surabattula, R. Rambabu
    Schuppan, Detlef
    [J]. AUTOIMMUNITY REVIEWS, 2021, 20 (01)
  • [20] RBP-J imposes a requirement for ITAM-mediated costimulation of osteoclastogenesis
    Li, Susan
    Miller, Christine H.
    Giannopoulou, Eugenia
    Hu, Xiaoyu
    Ivashkiv, Lionel B.
    Zhao, Baohong
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 2014, 124 (11) : 5057 - 5073