A hybrid metaheuristic algorithm for antimicrobial peptide toxicity prediction

被引:0
|
作者
Dao, Son Vu Truong [1 ,2 ]
Phan, Quynh Nguyen Xuan [1 ]
Tran, Ly Van [1 ]
Le, Tuan Minh [3 ]
Tran, Hieu Minh [3 ]
机构
[1] RMIT Univ Vietnam, Sch Sci Engn & Technol, Ho Chi Minh City 700000, Vietnam
[2] Vietnam Natl Univ, Int Univ, Sch Ind Engn & Management, Ho Chi Minh City 700000, Vietnam
[3] Vietnam Natl Univ, Int Univ, Sch Elect Engn, Ho Chi Minh City 700000, Vietnam
来源
SCIENTIFIC REPORTS | 2024年 / 14卷 / 01期
关键词
CHEMICAL-REACTION OPTIMIZATION; FEATURE-SELECTION; SEARCH;
D O I
10.1038/s41598-024-70462-y
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The development of new algorithms can aid researchers and professionals in resolving problems that were once unsolvable or discovering superior solutions to problems that were already settled. By recognizing the importance of continuous research on creating novel algorithms, this paper introduced a hybrid metaheuristic algorithm-h-PSOGNDO, which is a combination of Particle Swarm Optimization (PSO) and Generalized Normal Distribution Optimization (GNDO). The proposed algorithm utilizes the Particle Swarm Optimization's strategy for exploitation and the Generalized Normal Distribution Optimization's global search strategy for exploration. Through this combination, h-PSOGNDO is believed to be an effective algorithm that can promote the advantages of its parents' algorithms. Different assessment methods are used to assess the proposed novel algorithm. First, the h-PSOGNDO is set to conduct experiments on two sets of mathematical functions, including twenty-eight IEEE CEC2017 and ten IEEE CEC2019 benchmark test functions, respectively. Then, the h-PSOGNDO algorithm is applied to a case study on the prediction of antimicrobial peptides' toxicity to evaluate its performance on real-life problems. The statistical findings collected from both the test function sets and the case study show that the h-PSOGNDO algorithm works effectively, proving its astonishing ability to yield highly competitive outcomes for complex problems.
引用
收藏
页数:23
相关论文
共 50 条
  • [1] Sepsis Prediction by Using a Hybrid Metaheuristic Algorithm: A Novel Approach for Optimizing Deep Neural Networks
    Kaya, Umut
    Yilmaz, Atinc
    Asar, Sinan
    DIAGNOSTICS, 2023, 13 (12)
  • [2] Goal programming using multiple objective hybrid metaheuristic algorithm
    Dhouib, S.
    Kharrat, A.
    Chabchoub, H.
    JOURNAL OF THE OPERATIONAL RESEARCH SOCIETY, 2011, 62 (04) : 677 - 689
  • [3] An efficient hybrid metaheuristic algorithm for cardinality constrained portfolio optimization
    Kalayci, Can B.
    Polat, Olcay
    Akbay, Mehmet A.
    SWARM AND EVOLUTIONARY COMPUTATION, 2020, 54
  • [4] Hybrid Feature Selection and Peptide Binding Affinity Prediction using an EDA based Algorithm
    Shelke, Kalpesh
    Jayaraman, Srikant
    Ghosh, Shameek
    Valadi, Jayaraman
    2013 IEEE CONGRESS ON EVOLUTIONARY COMPUTATION (CEC), 2013, : 2384 - 2389
  • [5] Feature Selection Using Hybrid Metaheuristic Algorithm for Email Spam Detection
    Al-Rawashdeh, Ghada Hammad
    Khashan, Osama A.
    Al-Rawashde, Jawad
    Al-Gasawneh, Jassim Ahmad
    Alsokkar, Abdullah
    Alshinwa, Mohammad
    CYBERNETICS AND INFORMATION TECHNOLOGIES, 2024, 24 (02) : 156 - 171
  • [6] Hyperparameter Optimization of Support Vector Regression Algorithm using Metaheuristic Algorithm for Student Performance Prediction
    Apriyadi, M. Riki
    Ermatita
    Rini, Dian Palupi
    INTERNATIONAL JOURNAL OF ADVANCED COMPUTER SCIENCE AND APPLICATIONS, 2023, 14 (02) : 144 - 150
  • [7] A hybrid approach with metaheuristic optimization and random forest in improving heart disease prediction
    Narasimhan, Geetha
    Victor, Akila
    SCIENTIFIC REPORTS, 2025, 15 (01):
  • [8] A Hybrid Metaheuristic Algorithm for Features Dimensionality Reduction in Network Intrusion Detection System
    Balogun, Bukola Fatimah
    Gbolagade, Kazeem Alagbe
    Arowolo, Micheal Olaolu
    Saheed, Yakub Kayode
    COMPUTATIONAL SCIENCE AND ITS APPLICATIONS, ICCSA 2021, PT IX, 2021, 12957 : 101 - 114
  • [9] A new binary chaos-based metaheuristic algorithm for software defect prediction
    Arasteh, Bahman
    Arasteh, Keyvan
    Ghaffari, Ali
    Ghanbarzadeh, Reza
    CLUSTER COMPUTING-THE JOURNAL OF NETWORKS SOFTWARE TOOLS AND APPLICATIONS, 2024, 27 (07): : 10093 - 10123
  • [10] A Hybrid Bi-level Metaheuristic for Credit Scoring
    Sen, Doruk
    Donmez, Cem Cagri
    Yildirim, Umman Mahir
    INFORMATION SYSTEMS FRONTIERS, 2020, 22 (05) : 1009 - 1019