Bioinformatics analysis reveals key mechanisms of oligodendrocytes and oligodendrocyte precursor cells regulation in spinal cord Injury

被引:0
作者
Yue, Xi [1 ]
Chen, Xunling [2 ]
Zang, Yang [1 ]
Wu, Jinliang [1 ]
Chen, Guanhao [1 ]
Tan, Hongyu [1 ]
Yang, Kerong [1 ]
机构
[1] Zhengzhou Univ, Affiliated Hosp 1, Dept Orthoped, Zhengzhou, Peoples R China
[2] Zhengzhou Univ, Childrens Affiliated Hosp, Zhengzhou, Peoples R China
来源
SCIENTIFIC REPORTS | 2025年 / 15卷 / 01期
关键词
Spinal cord injury; ODC/OPC; Multi-omics; Regulatory network; Potential drugs; SCAR FORMATION; EPOTHILONE B; TRANSPLANTATION; CNS; NEUROPROTECTION; REGENERATION; MYELINATION; ASTROCYTES; EXPRESSION; RAPAMYCIN;
D O I
10.1038/s41598-025-90489-z
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Despite extensive research, spinal cord injuries (SCI), which could cause severe sensory, motor and autonomic dysfunction, remain largely incurable. Oligodendrocytes and oligodendrocyte precursor cells (ODC/OPC) play a crucial role in neural morphological repair and functional recovery following SCI. We performed single-cell sequencing (scRNA-seq) on 59,558 cells from 39 mouse samples, combined with microarray data from 164 SCI samples and 3 uninjured samples. We further validated our findings using a large clinical cohort consisting of 38 SCI patients, 10 healthy controls, and 10 trauma controls, assessed with the American Spinal Cord Injury Association (ASIA) scale. We proposed a novel SCI classification model based on the expression of prognostic differentially expressed ODC/OPC differentiation-related genes (PDEODGs). This model includes three types: Low ODC/OPC Score Classification (LOSC), Median ODC/OPC Score Classification (MOSC), and High ODC/OPC Score Classification (HOSC). Considering the relationship between these subtypes and prognosis, we speculated that enhancing ODC/OPC differentiation and inhibiting inflammatory infiltration may improve outcomes. Additionally, we identified potential treatments for SCI that target key genes within these subtypes, offering promising implications for therapy.
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页数:17
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共 62 条
[1]   Traumatic spinal cord injury [J].
Ahuja, Christopher S. ;
Wilson, Jefferson R. ;
Nori, Satoshi ;
Kotter, Mark R. N. ;
Druschel, Claudia ;
Curt, Armin ;
Fehlings, Michael G. .
NATURE REVIEWS DISEASE PRIMERS, 2017, 3
[2]   Cell transplantation therapy for spinal cord injury [J].
Assinck, Peggy ;
Duncan, Greg J. ;
Hilton, Brett J. ;
Plemel, Jason R. ;
Tetzlaff, Wolfram .
NATURE NEUROSCIENCE, 2017, 20 (05) :637-647
[3]   Reactive Gliosis and the Multicellular Response to CNS Damage and Disease [J].
Burda, Joshua E. ;
Sofroniew, Michael V. .
NEURON, 2014, 81 (02) :229-248
[4]   Integrating single-cell transcriptomic data across different conditions, technologies, and species [J].
Butler, Andrew ;
Hoffman, Paul ;
Smibert, Peter ;
Papalexi, Efthymia ;
Satija, Rahul .
NATURE BIOTECHNOLOGY, 2018, 36 (05) :411-+
[5]   Spatial Transcriptomics and In Situ Sequencing to Study Alzheimer's Disease [J].
Chen, Wei-Ting ;
Lu, Ashley ;
Craessaerts, Katleen ;
Pavie, Benjamin ;
Frigerio, Carlo Sala ;
Corthout, Nikky ;
Qian, Xiaoyan ;
Lalakova, Jana ;
Kuhnemund, Malte ;
Voytyuk, Iryna ;
Wolfs, Leen ;
Mancuso, Renzo ;
Salta, Evgenia ;
Balusu, Sriram ;
Snellinx, An ;
Munck, Sebastian ;
Jurek, Aleksandra ;
Navarro, Jose Fernandez ;
Saido, Takaomi C. ;
Huitinga, Inge ;
Lundeberg, Joakim ;
Fiers, Mark ;
De Strooper, Bart .
CELL, 2020, 182 (04) :976-+
[6]   Oligodendrocyte progenitor cell fate and function in development and disease [J].
Clayton, Benjamin L. L. ;
Tesar, Paul J. .
CURRENT OPINION IN CELL BIOLOGY, 2021, 73 :35-40
[7]   Spinal cord repair: advances in biology and technology [J].
Courtine, Gregoire ;
Sofroniew, Michael V. .
NATURE MEDICINE, 2019, 25 (06) :898-908
[8]   A First-in-Human, Phase I Study of Neural Stem Cell Transplantation for Chronic Spinal Cord Injury [J].
Curtis, Erik ;
Martin, Joel R. ;
Gabel, Brandon ;
Sidhu, Nikki ;
Rzesiewicz, Teresa K. ;
Mandeville, Ross ;
Van Gorp, Sebastiaan ;
Leerink, Marjolein ;
Tadokoro, Takahiro ;
Marsala, Silvia ;
Jamieson, Catriona ;
Marsala, Martin ;
Ciacci, Joseph D. .
CELL STEM CELL, 2018, 22 (06) :941-+
[9]   Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt [J].
Durinck, Steffen ;
Spellman, Paul T. ;
Birney, Ewan ;
Huber, Wolfgang .
NATURE PROTOCOLS, 2009, 4 (08) :1184-1191
[10]   Molecular Control of Oligodendrocyte Development [J].
Elbaz, Benayahu ;
Popko, Brian .
TRENDS IN NEUROSCIENCES, 2019, 42 (04) :263-277