Deciphering the multi-state binding and dissociation of fenofibrate with β-cyclodextrin and its derivatives: Insights from phase solubility analysis and molecular modeling

被引:0
作者
Ai, Fengwei [1 ]
Shen, Wenkang [2 ]
Shen, Quanye [2 ]
Yang, Hangtu [2 ]
Wang, Jiayu [3 ]
Yang, Meng [2 ]
Zhang, Zhiwen [2 ]
Zhang, Ningying [2 ]
Xue, Yunsheng [1 ]
机构
[1] Jiangsu Key Laboratory of New Drug Research and Clinical Pharmacy, School of Pharmacy, Xuzhou Medical University, No. 209, Tongshan Road, Jiangsu, Xuzhou
[2] School of Pharmacy, Xuzhou Medical University, No. 209, Tongshan Road, Jiangsu, Xuzhou
[3] Jiangsu Nhwa Pharmaceutical Co., Ltd, Jiangsu, Xuzhou
关键词
Binding–dissociation; Conformational transformations; Fenofibrate inclusion complex; Intermolecular interactions; Thermodynamics analysis;
D O I
10.1016/j.molliq.2024.126374
中图分类号
学科分类号
摘要
The present study focuses on elucidating the multi-state binding and dissociation interaction of fenofibrate (FNB) with β-cyclodextrin and its derivatives hydroxypropyl-β-cyclodextrin (HP-β-CD) and sulfobutylether-β-cyclodextrin (SBE-β-CD), with a specific emphasis on the correlation between phase solubility analysis and molecular modeling. The dynamic complexation, conformational stability, configuration transition, and binding energy (ΔEbinding) were investigated based on molecular dynamics (MD) simulations. Subsequently, the quantum mechanical calculations were performed to strengthen the MD results. The dissociation of FNB from both rims of the three cyclodextrins (CDs) was examined using umbrella sampling simulations. The FNB molecule was found to bind to CD in a 1:1 stoichiometry with spontaneous and thermodynamic favorability. The binding ability of FNB with three CDs was arranged in the following sequence: SBE-β-CD > HP-β-CD > β-CD. Moreover, the binding conformations in parallel showed a lower ΔEbinding than those in an anti-parallel arrangement. The FNB molecule exhibited an equal probability of dissociating from the primary and secondary cavity orientations of β-CD. In contrast, for HP-β-CD and SBE-β-CD, FNB tended to dissociate from the primary cavity positions. The combination of the phase solubility method with molecular modeling afforded an in-depth and comprehensive understanding of the interactions between FNB and different CDs and has the potential to be generally applicable to the design and optimization of CD carrier materials to enhance the water solubility of poorly soluble compounds. © 2024 Elsevier B.V.
引用
收藏
相关论文
共 85 条
  • [71] Ross P.D., Subramanian S., Thermodynamics of protein association reactions: forces contributing to stability, Biochemistry (Mosc.), 20, pp. 3096-3102, (1981)
  • [72] Wenz G., Influence of intramolecular hydrogen bonds on the binding potential of methylated β-cyclodextrin derivatives, Beilstein J. Org. Chem., 8, pp. 1890-1895, (2012)
  • [73] Tongiani S., Ozeki T., Stella V.J., Sulfobutyl ether-alkyl ether mixed cyclodextrin derivatives with enhanced inclusion ability, J. Pharm. Sci., 98, pp. 4769-4780, (2009)
  • [74] Miskolczy Z., Megyesi M., Biczok L., Entropy-Driven Inclusion of Natural Protoberberine Alkaloids in Sulfobutylether-β-Cyclodextrin, Molecules, 27, (2022)
  • [75] Jullian C., Orosteguis T., Perez-Cruz F., Sanchez P., Mendizabal F., Olea-Azar C., Complexation of morin with three kinds of cyclodextrin A thermodynamic and reactivity study, Spectrochim. Acta A Mol. Biomol. Spectrosc., 71, pp. 269-275, (2008)
  • [76] Li T., Guo R., Zong Q., Ling G., Application of molecular docking in elaborating molecular mechanisms and interactions of supramolecular cyclodextrin, Carbohyd. Polym., 276, (2022)
  • [77] Krishnan A., Viruthachalam T., Rajendran K., A fluorescence approach on the investigation of urea derivatives interaction with a non-PET based acridinedione dye-beta Cyclodextrin (β-CD) complex in water: Hydrogen-bonding interaction or hydrophobic influences or combined effect?, Spectrochim. Acta A Mol. Biomol. Spectrosc., 246, (2021)
  • [78] Yu Y., Xu S., He R., Liang G., Application of Molecular Simulation Methods in Food Science: Status and Prospects, J. Agric. Food Chem., 71, pp. 2684-2703, (2023)
  • [79] Christ C.D., Mark A.E., van Gunsteren W.F., Basic ingredients of free energy calculations: a review, J. Comput. Chem., 31, pp. 1569-1582, (2010)
  • [80] Ngueanngam N., Jityuti B., Patnin S., Boonsri P., Makarasen A., Buranaprapuk A., Multiple spectroscopic and computational studies on binding interaction of 2-phenylamino-4-phenoxyquinoline derivatives with bovine serum albumin, Spectrochim. Acta A Mol. Biomol. Spectrosc., 310, (2024)