Nonequilibrium cluster-cluster aggregation in the presence of anchoring sites

被引:1
作者
Baillou, Renaud [1 ,2 ]
Ranft, Jonas [1 ]
机构
[1] Univ PSL, CNRS, Inst Biol ENS, Ecole Normale Super,INSERM, 46 Rue Ulm, F-75005 Paris, France
[2] ESPCI, PMMH, F-75005 Paris, France
关键词
Cell membranes;
D O I
10.1103/PhysRevE.110.034410
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
Nonequilibrium cluster-cluster aggregation of particles diffusing in or at the cell membrane has been hypothesized to lead to domains of finite size in different biological contexts, such as lipid rafts, cell adhesion complexes, or postsynaptic domains in neurons. In this scenario, the desorption of particles balances a continuous flux to the membrane, imposing a cutoff on possible aggregate sizes and giving rise to a stationary size distribution. Here, we investigate the case of nonequilibrium cluster-cluster aggregation in two dimensions where diffusing particles and/or clusters remain fixed in space at specific anchoring sites, which should be particularly relevant for synapses but may also be present in other biological or physical systems. Using an effective mean-field description of the concentration field around anchored clusters, we derive an expression for their average size as a function of parameters such as the anchoring site density. We furthermore propose and solve appropriate rate equations that allow us to predict the size distributions of both diffusing and fixed clusters. We confirm our results with particle-based simulations and discuss potential implications for biological and physical systems.
引用
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页数:8
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共 31 条
[1]  
[Anonymous], 1916, Physik Zeit.
[2]   Self-consistent rate theory of submonolayer homoepitaxy with attachment/detachment kinetics [J].
Bales, GS ;
Zangwill, A .
PHYSICAL REVIEW B, 1997, 55 (04) :R1973-R1976
[3]   Principles of E-Cadherin Supramolecular Organization In Vivo [J].
Binh-An Truong Quang ;
Mani, Madhav ;
Markova, Olga ;
Lecuit, Thomas ;
Lenne, Pierre-Francois .
CURRENT BIOLOGY, 2013, 23 (22) :2197-2207
[4]   Germline P Granules Are Liquid Droplets That Localize by Controlled Dissolution/Condensation [J].
Brangwynne, Clifford P. ;
Eckmann, Christian R. ;
Courson, David S. ;
Rybarska, Agata ;
Hoege, Carsten ;
Gharakhani, Joebin ;
Juelicher, Frank ;
Hyman, Anthony A. .
SCIENCE, 2009, 324 (5935) :1729-1732
[5]   Theory of phase-ordering kinetics [J].
Bray, AJ .
ADVANCES IN PHYSICS, 2002, 51 (02) :481-587
[6]   Asymptotic analysis of particle cluster formation in the presence of anchoring sites [J].
Bressloff, Paul C. .
EUROPEAN PHYSICAL JOURNAL E, 2024, 47 (05)
[7]   Active suppression of Ostwald ripening: Beyond mean-field theory [J].
Bressloff, Paul C. .
PHYSICAL REVIEW E, 2020, 101 (04)
[8]   Two-dimensional interfacial diffusion model of inhibitory synaptic receptor dynamics [J].
Bressloff, Paul. C. C. .
PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES, 2023, 479 (2274)
[9]   Gephyrin Oligomerization Controls GlyR Mobility and Synaptic Clustering [J].
Calamai, Martino ;
Specht, Christian G. ;
Heller, Janosch ;
Alcor, Damien ;
Machado, Patricia ;
Vannier, Christian ;
Triller, Antoine .
JOURNAL OF NEUROSCIENCE, 2009, 29 (24) :7639-7648
[10]   Reciprocal stabilization of glycine receptors and gephyrin scaffold proteins at inhibitory synapses [J].
Chapdelaine, Thomas ;
Hakim, Vincent ;
Triller, Antoine ;
Ranft, Jonas ;
Specht, Christian G. .
BIOPHYSICAL JOURNAL, 2021, 120 (05) :805-817