Molecular Spies in Action: Genetically Encoded Fluorescent Biosensors Light up Cellular Signals

被引:5
作者
Gest, Anneliese M. M. [1 ]
Sahan, Ayse Z. [1 ,2 ]
Zhong, Yanghao [1 ]
Lin, Wei [1 ]
Mehta, Sohum [1 ]
Zhang, Jin [3 ,4 ]
机构
[1] Univ Calif San Diego, Dept Pharmacol, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, Biomed Sci Grad Program, La Jolla, CA 92093 USA
[3] Univ Calif San Diego, Dept Pharmacol, Shu Chien Gene Lay Dept Bioengn, La Jolla, CA 92093 USA
[4] Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA 92093 USA
基金
美国国家卫生研究院;
关键词
RESONANCE ENERGY-TRANSFER; PROTEIN-KINASE-C; VISUALIZING SPATIOTEMPORAL DYNAMICS; COMPLEMENTATION BIFC ANALYSIS; SINGLE DENDRITIC SPINES; FRET-BASED SENSOR; IN-VIVO; LIVE-CELL; LIVING CELLS; GENE-EXPRESSION;
D O I
10.1021/acs.chemrev.4c00293
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Cellular function is controlled through intricate networks of signals, which lead to the myriad pathways governing cell fate. Fluorescent biosensors have enabled the study of these signaling pathways in living systems across temporal and spatial scales. Over the years there has been an explosion in the number of fluorescent biosensors, as they have become available for numerous targets, utilized across spectral space, and suited for various imaging techniques. To guide users through this extensive biosensor landscape, we discuss critical aspects of fluorescent proteins for consideration in biosensor development, smart tagging strategies, and the historical and recent biosensors of various types, grouped by target, and with a focus on the design and recent applications of these sensors in living systems.
引用
收藏
页码:12573 / 12660
页数:88
相关论文
共 810 条
  • [1] A general approach to engineer positive-going eFRET voltage indicators
    Abdelfattah, Ahmed S.
    Valenti, Rosario
    Zheng, Jihong
    Wong, Allan
    Podgorski, Kaspar
    Koyama, Minoru
    Kim, Douglas S.
    Schreiter, Eric R.
    [J]. NATURE COMMUNICATIONS, 2020, 11 (01)
  • [2] Bright and photostable chemigenetic indicators for extended in vivo voltage imaging
    Abdelfattah, Ahmed S.
    Kawashima, Takashi
    Singh, Amrita
    Novak, Ondrej
    Liu, Hui
    Shuai, Yichun
    Huang, Yi-Chieh
    Campagnola, Luke
    Seeman, Stephanie C.
    Yu, Jianing
    Zheng, Jihong
    Grimm, Jonathan B.
    Patel, Ronak
    Friedrich, Johannes
    Mensh, Brett D.
    Paninski, Liam
    Macklin, John J.
    Murphy, Gabe J.
    Podgorski, Kaspar
    Lin, Bei-Jung
    Chen, Tsai-Wen
    Turner, Glenn C.
    Liu, Zhe
    Koyama, Minoru
    Svoboda, Karel
    Ahrens, Misha B.
    Lavis, Luke D.
    Schreiter, Eric R.
    [J]. SCIENCE, 2019, 365 (6454) : 699 - +
  • [3] A Bright and Fast Red Fluorescent Protein Voltage Indicator That Reports Neuronal Activity in Organotypic Brain Slices
    Abdelfattah, Ahmed S.
    Farhi, Samouil L.
    Zhao, Yongxin
    Brinks, Daan
    Zou, Peng
    Ruangkittisakul, Araya
    Platisa, Jelena
    Pieribone, Vincent A.
    Ballanyi, Klaus
    Cohen, Adam E.
    Campbell, Robert E.
    [J]. JOURNAL OF NEUROSCIENCE, 2016, 36 (08) : 2458 - 2472
  • [4] Enzymatic promiscuity and the evolution of bioluminescence
    Adams, Spencer T., Jr.
    Miller, Stephen C.
    [J]. FEBS JOURNAL, 2020, 287 (07) : 1369 - 1380
  • [5] Exploration of new chromophore structures leads to the identification of improved blue fluorescent proteins
    Ai, Hui-wang
    Shaner, Nathan C.
    Cheng, Zihao
    Tsien, Roger Y.
    Campbell, Robert E.
    [J]. BIOCHEMISTRY, 2007, 46 (20) : 5904 - 5910
  • [6] Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics
    Akerboom, Jasper
    Calderon, Nicole Carreras
    Tian, Lin
    Wabnig, Sebastian
    Prigge, Matthias
    Tolo, Johan
    Gordus, Andrew
    Orger, Michael B.
    Severi, Kristen E.
    Macklin, John J.
    Patel, Ronak
    Pulver, Stefan R.
    Wardill, Trevor J.
    Fischer, Elisabeth
    Schueler, Christina
    Chen, Tsai-Wen
    Sarkisyan, Karen S.
    Marvin, Jonathan S.
    Bargmann, Cornelia I.
    Kim, Douglas S.
    Kugler, Sebastian
    Lagnado, Leon
    Hegemann, Peter
    Gottschalk, Alexander
    Schreiter, Eric R.
    Looger, Loren L.
    [J]. FRONTIERS IN MOLECULAR NEUROSCIENCE, 2013, 6
  • [7] Quantitative imaging of RNA polymerase II activity in plants reveals the single-cell basis of tissue-wide transcriptional dynamics
    Alamos, Simon
    Reimer, Armando
    Niyogi, Krishna K.
    Garcia, Hernan G.
    [J]. NATURE PLANTS, 2021, 7 (08) : 1037 - +
  • [8] Alenghat Francis J, 2002, Sci STKE, V2002, ppe6, DOI 10.1126/stke.2002.119.pe6
  • [9] Dimerization-Dependent Green and Yellow Fluorescent Proteins
    Alford, Spencer C.
    Ding, Yidan
    Simmen, Thomas
    Campbell, Robert E.
    [J]. ACS SYNTHETIC BIOLOGY, 2012, 1 (12): : 569 - 575
  • [10] A Fluorogenic Red Fluorescent Protein Heterodimer
    Alford, Spencer C.
    Abdelfattah, Ahmed S.
    Ding, Yidan
    Campbell, Robert E.
    [J]. CHEMISTRY & BIOLOGY, 2012, 19 (03): : 353 - 360