De Novo Peptide Sequencing Using Exhaustive Enumeration of Peptide Composition

被引:0
作者
Olson, Matthew T. [1 ]
Epstein, Jonathan A. [2 ]
Yergey, Alfred L. [1 ]
机构
[1] Laboratory of Cellular and Molecular Biophysics, NICHD, NIH, Bethesda, MD, United States
[2] Unit of Biologic Computation, OSD, NICHD, Bethesda, MD, United States
来源
Journal of the American Society for Mass Spectrometry | 2006年 / 17卷 / 08期
关键词
29;
D O I
暂无
中图分类号
学科分类号
摘要
Journal article (JA)
引用
收藏
页码:1041 / 1049
相关论文
共 50 条
  • [31] De novo peptide sequencing via tandem mass spectrometry
    Dancík, V
    Addona, TA
    Clauser, KR
    Vath, JE
    Pevzner, PA
    JOURNAL OF COMPUTATIONAL BIOLOGY, 1999, 6 (3-4) : 327 - 342
  • [32] De novo peptide sequencing and identification with precision mass spectrometry
    Frank, Ari M.
    Savitski, Mikhail M.
    Nielsen, Michael L.
    Zubarev, Roman A.
    Pevzner, Pavel A.
    JOURNAL OF PROTEOME RESEARCH, 2007, 6 (01) : 114 - 123
  • [33] Peptide de novo sequencing of mixture tandem mass spectra
    Gorshkov, Vladimir
    Hotta, Stephanie Yuki Kolbeck
    Verano-Braga, Thiago
    Kjeldsen, Frank
    PROTEOMICS, 2016, 16 (18) : 2470 - 2479
  • [34] An Approach for Peptide Identification by De Novo Sequencing of Mixture Spectra
    Liu, Yi
    Ma, Bin
    Zhang, Kaizhong
    Lajoie, Gilles
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2017, 14 (02) : 326 - 336
  • [35] A simplified method for peptide de novo sequencing using 18O labeling
    Vorac, Ales
    Sedo, Ondrej
    Havlis, Jan
    Zdrahal, Zbynek
    EUROPEAN JOURNAL OF MASS SPECTROMETRY, 2014, 20 (03) : 255 - 260
  • [36] Spectrum fusion: Using multiple mass spectra for. de novo peptide Sequencing
    Datta, Ritendra
    Bern, Marshall
    RESEARCH IN COMPUTATIONAL MOLECULAR BIOLOGY, PROCEEDINGS, 2008, 4955 : 140 - +
  • [37] GA-Novo: De Novo Peptide Sequencing via Tandem Mass Spectrometry Using Genetic Algorithm
    Azari, Samaneh
    Xue, Bing
    Zhang, Mengjie
    Peng, Lifeng
    APPLICATIONS OF EVOLUTIONARY COMPUTATION, EVOAPPLICATIONS 2019, 2019, 11454 : 72 - 89
  • [38] PepNovo: De novo peptide sequencing via probabilistic network modeling
    Frank, A
    Pevzner, P
    ANALYTICAL CHEMISTRY, 2005, 77 (04) : 964 - 973
  • [39] ContraNovo: A Contrastive Learning Approach to Enhance De Novo Peptide Sequencing
    Jin, Zhi
    Xu, Sheng
    Zhang, Xiang
    Ling, Tianze
    Dong, Nanqing
    Ouyang, Wanli
    Gao, Zhiqiang
    Chang, Cheng
    Sun, Siqi
    THIRTY-EIGHTH AAAI CONFERENCE ON ARTIFICIAL INTELLIGENCE, VOL 38 NO 1, 2024, : 144 - 152
  • [40] A dynamic programming algorithm for de novo peptide sequencing with variable scoring
    Goto, Matthew A.
    Schwabe, Eric J.
    BIOINFORMATICS RESEARCH AND APPLICATIONS, 2008, 4983 : 171 - 182