Enhancing COVID-19 disease severity classification through advanced transfer learning techniques and optimal weight initialization schemes

被引:0
作者
Geroski, Tijana [1 ,2 ]
Rankovic, Vesna [1 ]
Pavic, Ognjen [2 ,3 ]
Dasic, Lazar [2 ,3 ]
Petrovic, Marina [4 ,5 ]
Milovanovic, Dragan [4 ,5 ]
Filipovic, Nenad [1 ,2 ]
机构
[1] Univ Kragujevac, Fac Engn, Kragujevac, Serbia
[2] Bioengn Res & Dev Ctr BioIRC, Kragujevac, Serbia
[3] Univ Kragujevac, Inst Informat Technol, Kragujevac, Serbia
[4] Univ Clin Ctr Kragujevac, Kragujevac, Serbia
[5] Univ Kragujevac, Fac Med Sci, Kragujevac, Serbia
关键词
COVID-19 severity classification; Medical images; Multi-class classification; Transfer learning; Weight initialization;
D O I
10.1016/j.bspc.2024.107103
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Objective: Medical imaging plays a central role in medicine today by supporting diagnosis and treatment. For small medical image datasets, training from scratch is a time-consuming process and transfer learning emerges as a solution. In these cases, ImageNet weights are usually used as initial weights, after which fine-tuning is performed. We propose a methodology for COVID-19 severity classification (mild, moderate, severe, critical) in chest X-ray images based on transfer learning using DenseNet121 architecture as a base model. Methods: The novelty of the approach mainly lies in the investigation of three different weight initialization schemes (i) ImageNet (ii) CheXNeXt (iii) DeepCOVID-XR, which are similar in a graded manner in terms of image nature, with ImageNet being the least similar, CheXNeXt similar as they were trained on different lung diseases not including COVID-19 and DeepCOVID-XR the most similar as they were obtained by training specifically on COVID-19 X-ray images. Results: The results show that the worst results are achieved using ImageNet as initial weights (average AUC = 0.700), followed by the better results with DeepCOVID-XR (average AUC = 0.774) while CheXNeXt performed significantly better (average AUC = 0.917). The results of weaker performing classification models were improved when the severe and critical classes were merged, to account for the similarity between these classes in the dataset (average AUC for initialization schemes were ImageNet AUC = 0.867, CheXNeXt AUC = 0.900 and DeepCOVID-XR AUC = 0.794). Conclusion: This leads to a conclusion that, in the medical domain, where image datasets are usually small and highly imbalanced, if initial weights are chosen to be in nature similar to the new dataset, achieved results are better. However, there is no need to start from weights obtained during training on the same disease, as this may cause overfitting. There are significant discrepancies between ImageNet and medical imaging datasets and the results from this paper could help in guiding future implementations of transfer learning in medical applications.
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页数:12
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共 41 条
  • [1] COVID-19 CT-images diagnosis and severity assessment using machine learning algorithm
    Albataineh, Zaid
    Aldrweesh, Fatima
    Alzubaidi, Mohammad A.
    [J]. CLUSTER COMPUTING-THE JOURNAL OF NETWORKS SOFTWARE TOOLS AND APPLICATIONS, 2024, 27 (01): : 547 - 562
  • [2] Transfer learning-based approach for detecting COVID-19 ailment in lung CT scan
    Arora, Vinay
    Ng, Eddie Yin-Kwee
    Leekha, Rohan Singh
    Darshan, Medhavi
    Singh, Arshdeep
    [J]. COMPUTERS IN BIOLOGY AND MEDICINE, 2021, 135
  • [3] Azhari M., 2022, medRxiv
  • [4] An automated diagnosis and classification of COVID-19 from chest CT images using a transfer learning-based convolutional neural network
    Baghdadi, Nadiah A.
    Malki, Amer
    Abdelaliem, Sally F.
    Balaha, Hossam Magdy
    Badawy, Mahmoud
    Elhosseini, Mostafa
    [J]. COMPUTERS IN BIOLOGY AND MEDICINE, 2022, 144
  • [5] An optimized transfer learning-based approach for automatic diagnosis of COVID-19 from chest x-ray images
    Bahgat, Waleed M.
    Balaha, Hossam Magdy
    AbdulAzeem, Yousry
    Badawy, Mahmoud M.
    [J]. PEERJ COMPUTER SCIENCE, 2021,
  • [6] Infectious Diseases Society of America Guidelines on the Treatment and Management of Patients With COVID-19 (April 2020)
    Bhimraj, Adarsh
    Morgan, Rebecca L.
    Shumaker, Amy Hirsch
    Lavergne, Valery
    Baden, Lindsey
    Cheng, Vincent Chi-Chung
    Edwards, Kathryn M.
    Gandhi, Rajesh
    Muller, William J.
    O'Horo, John C.
    Shoham, Shmuel
    Murad, M. Hassan
    Mustafa, Reem A.
    Sultan, Shahnaz
    Falck-Ytter, Yngve
    [J]. CLINICAL INFECTIOUS DISEASES, 2020, 78 (07) : e83 - e102
  • [7] Explainable artificial intelligence approaches for COVID-19 prognosis prediction using clinical markers
    Chadaga, Krishnaraj
    Prabhu, Srikanth
    Sampathila, Niranjana
    Chadaga, Rajagopala
    Umakanth, Shashikiran
    Bhat, Devadas
    Kumar, G. S. Shashi
    [J]. SCIENTIFIC REPORTS, 2024, 14 (01)
  • [8] A Novel Transfer Learning Based Approach for Pneumonia Detection in Chest X-ray Images
    Chouhan, Vikash
    Singh, Sanjay Kumar
    Khamparia, Aditya
    Gupta, Deepak
    Tiwari, Prayag
    Moreira, Catarina
    Damasevicius, Robertas
    de Albuquerque, Victor Hugo C.
    [J]. APPLIED SCIENCES-BASEL, 2020, 10 (02):
  • [9] Automatic detection of Covid-19 from chest X-ray and lung computed tomography images using deep neural networks and transfer learning
    Duong, Linh T.
    Nguyen, Phuong T.
    Iovino, Ludovico
    Flammini, Michele
    [J]. APPLIED SOFT COMPUTING, 2023, 132
  • [10] COVID-19 detection from chest X-ray images using transfer learning
    El Houby, Enas M. F.
    [J]. SCIENTIFIC REPORTS, 2024, 14 (01):