Complexes discovery from weighted protein-protein interaction networks

被引:0
|
作者
Liu, Lizhen [1 ]
Cheng, Miaomiao [1 ]
Wang, Hanshi [1 ]
Song, Wei [1 ]
机构
[1] Information and Engineering College, Capital Normal University, Beijing,100048, China
来源
Journal of Bionanoscience | 2015年 / 9卷 / 01期
关键词
Cellular organization - Hypergeometric - Interaction networks - Multiple data sources - Protein complexes - Protein network - Protein-protein interactions - Weighted protein-protein interaction networks;
D O I
10.1166/jbns.2015.1275
中图分类号
学科分类号
摘要
28
引用
收藏
页码:55 / 62
相关论文
共 50 条
  • [11] Detecting overlapping protein complexes in protein-protein interaction networks
    Nepusz T.
    Yu H.
    Paccanaro A.
    Nature Methods, 2012, 9 (5) : 471 - 472
  • [12] Detecting overlapping protein complexes in protein-protein interaction networks
    Nepusz, Tamas
    Yu, Haiyuan
    Paccanaro, Alberto
    NATURE METHODS, 2012, 9 (05) : 471 - U81
  • [13] Human protein-protein interaction networks and the value for drug discovery
    Ruffner, Heinz
    Bauer, Andreas
    Bouwmeester, Tewis
    DRUG DISCOVERY TODAY, 2007, 12 (17-18) : 709 - 716
  • [14] Identifying Protein Complexes from Dynamic Temporal Interval Protein-Protein Interaction Networks
    Zhang, Jinxiong
    Zhong, Cheng
    Lin, Hai Xiang
    Wang, Mian
    BIOMED RESEARCH INTERNATIONAL, 2019, 2019
  • [15] Essential Proteins Discovery from Weighted Protein Interaction Networks
    Li, Min
    Wang, Jianxin
    Wang, Huan
    Pan, Yi
    BIOINFORMATICS RESEARCH AND APPLICATIONS, PROCEEDINGS, 2010, 6053 : 89 - 100
  • [16] Protein-protein interaction networks: from interactions to networks
    Cho, SY
    Park, SG
    Lee, DH
    Park, BC
    JOURNAL OF BIOCHEMISTRY AND MOLECULAR BIOLOGY, 2004, 37 (01): : 45 - 52
  • [17] Essential Protein Detection by Random Walk on Weighted Protein-Protein Interaction Networks
    Xu, Bin
    Guan, Jihong
    Wang, Yang
    Wang, Zewei
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2019, 16 (02) : 377 - 387
  • [18] HKC: An Algorithm to Predict Protein Complexes in Protein-Protein Interaction Networks
    Wang, Xiaomin
    Wang, Zhengzhi
    Ye, Jun
    JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY, 2011,
  • [19] RocSampler: Regularizing Overlapping Protein Complexes in Protein-Protein Interaction Networks
    Maruyama, Osamu
    Kuwahara, Yuki
    2016 IEEE 6TH INTERNATIONAL CONFERENCE ON COMPUTATIONAL ADVANCES IN BIO AND MEDICAL SCIENCES (ICCABS), 2016,
  • [20] RocSampler: regularizing overlapping protein complexes in protein-protein interaction networks
    Osamu Maruyama
    Yuki Kuwahara
    BMC Bioinformatics, 18