Complexes discovery from weighted protein-protein interaction networks

被引:0
|
作者
Liu, Lizhen [1 ]
Cheng, Miaomiao [1 ]
Wang, Hanshi [1 ]
Song, Wei [1 ]
机构
[1] Information and Engineering College, Capital Normal University, Beijing,100048, China
来源
Journal of Bionanoscience | 2015年 / 9卷 / 01期
关键词
Cellular organization - Hypergeometric - Interaction networks - Multiple data sources - Protein complexes - Protein network - Protein-protein interactions - Weighted protein-protein interaction networks;
D O I
10.1166/jbns.2015.1275
中图分类号
学科分类号
摘要
28
引用
收藏
页码:55 / 62
相关论文
共 50 条
  • [1] Essential proteins discovery from weighted protein-protein interaction networks
    Wang, Hanshi, 1600, American Scientific Publishers (08):
  • [2] A Method for Predicting Protein Complexes from Dynamic Weighted Protein-Protein Interaction Networks
    Liu, Lizhen
    Sun, Xiaowu
    Song, Wei
    Du, Chao
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2018, 25 (06) : 586 - 605
  • [3] Discovery of motif pairs from protein-protein interaction networks
    Zhang, Hong
    Xu, Yun
    Zhao, Yuzhong
    2009 INTERNATIONAL JOINT CONFERENCE ON BIOINFORMATICS, SYSTEMS BIOLOGY AND INTELLIGENT COMPUTING, PROCEEDINGS, 2009, : 293 - 296
  • [4] DISTANCE-WISE PATHWAY DISCOVERY FROM PROTEIN-PROTEIN INTERACTION NETWORKS WEIGHTED BY SEMANTIC SIMILARITY
    Jaromerska, Slavka
    Praus, Petr
    Cho, Young-Rae
    JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2014, 12 (01)
  • [5] Detecting Protein Complexes from Signed Protein-Protein Interaction Networks
    Le Ou-Yang
    Dai, Dao-Qing
    Zhang, Xiao-Fei
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2015, 12 (06) : 1333 - 1344
  • [6] IDENTIFICATION OF ESSENTIAL PROTEINS FROM WEIGHTED PROTEIN-PROTEIN INTERACTION NETWORKS
    Li, Min
    Wang, Jian-Xin
    Wang, Huan
    Pan, Yi
    JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2013, 11 (03)
  • [7] Protein-protein interaction networks as miners of biological discovery
    Wang, Steven
    Wu, Runxin
    Lu, Jiaqi
    Jiang, Yijia
    Huang, Tao
    Cai, Yu-Dong
    PROTEOMICS, 2022, 22 (15-16)
  • [8] Prediction of Heterodimeric Protein Complexes from Weighted Protein-Protein Interaction Networks Using Novel Features and Kernel Functions
    Ruan, Peiying
    Hayashida, Morihiro
    Maruyama, Osamu
    Akutsu, Tatsuya
    PLOS ONE, 2013, 8 (06):
  • [9] Detecting temporal protein complexes from dynamic protein-protein interaction networks
    Le Ou-Yang
    Dao-Qing Dai
    Xiao-Li Li
    Min Wu
    Xiao-Fei Zhang
    Peng Yang
    BMC Bioinformatics, 15
  • [10] Detecting temporal protein complexes from dynamic protein-protein interaction networks
    Ou-Yang, Le
    Dai, Dao-Qing
    Li, Xiao-Li
    Wu, Min
    Zhang, Xiao-Fei
    Yang, Peng
    BMC BIOINFORMATICS, 2014, 15