Amoeba Monte Carlo algorithms for random trees with controlled branching activity: Efficient trial move generation and universal dynamics

被引:0
作者
van der Hoek, Pieter H. W. [1 ]
Rosa, Angelo [1 ]
Everaers, Ralf [2 ,3 ]
机构
[1] SISSA Scuola Int Super Studi Avanzati, Via Bonomea 265, I-34136 Sissa, Trieste, Italy
[2] CNRS, ENS Lyon, Lab Phys LPENSL, UMR5672, F-69342 Lyon 07, France
[3] Ctr Blaise Pascal, F-69342 Lyon 07, France
关键词
CRITICAL EXPONENTS; LATTICE ANIMALS; POLYMER-CHAIN; RING POLYMERS; FLORY THEORY; STATISTICS; DIMENSIONS; MODEL; RENORMALIZATION; COMPACTION;
D O I
10.1103/PhysRevE.110.045312
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
The reptation Monte Carlo algorithm is a simple, physically motivated and efficient method for equilibrating semidilute solutions of linear polymers. Here, we propose two simple generalizations for the analog Amoeba algorithm for randomly branching chains, which allow us to efficiently deal with random trees with controlled branching activity. We analyze the rich relaxation dynamics of Amoeba algorithms and demonstrate the existence of an unexpected scaling regime for the tree relaxation. Our results suggest that the equilibration time for Amoeba algorithms scales in general like N-2(n(lin))(Delta), where N denotes the number of tree nodes, (n(lin)) the mean number of linear segments the trees are composed of, and Delta similar or equal to 0.4.
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页数:16
相关论文
共 70 条
  • [1] SERIES STUDY OF RANDOM ANIMALS IN GENERAL DIMENSIONS
    ADLER, J
    MEIR, Y
    HARRIS, AB
    AHARONY, A
    DUARTE, JAMS
    [J]. PHYSICAL REVIEW B, 1988, 38 (07): : 4941 - 4954
  • [2] NEW ALGORITHM FOR MONTE-CARLO SIMULATION OF ISING SPIN SYSTEMS
    BORTZ, AB
    KALOS, MH
    LEBOWITZ, JL
    [J]. JOURNAL OF COMPUTATIONAL PHYSICS, 1975, 17 (01) : 10 - 18
  • [3] Bovier A., 1984, Critical Phenomena, Random Systems, Gauge Theories
  • [4] Burchard W, 1999, ADV POLYM SCI, V143, P113
  • [5] A NEW MONTE-CARLO SIMULATION FOR 2 MODELS OF SELF-AVOIDING LATTICE TREES IN 2 DIMENSIONS
    CARACCIOLO, S
    GLAUS, U
    [J]. JOURNAL OF STATISTICAL PHYSICS, 1985, 41 (1-2) : 95 - 114
  • [6] Cox D. R., 2017, THEORY STOCHASTIC PR
  • [7] Polymer-mediated compaction and internal dynamics of isolated Escherichia coli nucleoids
    Cunha, S
    Woldringh, CL
    Odijk, T
    [J]. JOURNAL OF STRUCTURAL BIOLOGY, 2001, 136 (01) : 53 - 66
  • [8] CONFORMATION OF BRANCHED POLYMERS
    DAOUD, M
    JOANNY, JF
    [J]. JOURNAL DE PHYSIQUE, 1981, 42 (10): : 1359 - 1371
  • [9] de Alcantara Bonfim O. F., 1980, J. Phys. A: Math. Gen., V13, pL247, DOI [DOI 10.1088/0305-4470/13/7/006, 10.1088/0305-4470/13/7/006]
  • [10] DEGENNES PG, 1976, J PHYS LETT-PARIS, V37, pL59, DOI 10.1051/jphyslet:0197600370405900