Role of Tyrosine Phosphorylation in PTP-PEST

被引:0
作者
Srinivasan, Sreevidya Thirumalai [1 ,3 ]
Manikandan, Amrutha [2 ]
Manoj, Narayanan [2 ]
Dixit, Madhulika [2 ]
Vemparala, Satyavani [1 ,3 ]
机构
[1] Homi Bhabha Natl Inst, Mumbai 400094, India
[2] Indian Inst Technol Madras, Dept Biotechnol, Chennai 600036, India
[3] Inst Math Sci, Chennai 600113, India
关键词
MOLECULAR-DYNAMICS SIMULATION; PARTICLE MESH EWALD; WPD-LOOP MOVEMENT; PROTEIN-PHOSPHORYLATION; SOFTWARE NEWS; EVOLUTIONARY CONSERVATION; SH2; DOMAIN; PHOSPHATASES; KINASE; PREDICTION;
D O I
10.1021/acs.jpcb.4c04047
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We study the influence of tyrosine phosphorylation on PTP-PEST, a cytosolic protein tyrosine phosphatase. Utilizing a combination of experimental data and computational modeling, specific tyrosine sites, notably, Y64 and Y88, are identified for potential phosphorylation. Phosphorylation at these sites affects loop dynamics near the catalytic site, altering interactions among key residues and modifying the size of the binding pocket. This, in turn, impacts substrate binding, as indicated by changes in the binding energy. Our findings provide insights into the structural and functional consequences of tyrosine phosphorylation on PTP-PEST, enhancing our understanding of its effects on substrate binding and catalytic conformation.
引用
收藏
页码:10581 / 10592
页数:12
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