Cryo-Electron Microscopy Studies of Biomolecular Structure and Dynamics

被引：0

作者：

Kulczyk, Arkadiusz W. ^{[1
,2
,3
]}

机构：

[1] Rutgers State Univ, Inst Quantitat Biomed, 174 Frelinghuysen Rd, Piscataway, NJ 08854 USA

[2] Rutgers State Univ, Dept Biochem & Microbiol, 75 Lipman Dr, New Brunswick, NJ 08901 USA

[3] CryoEMcorp, Bridgewater, NJ 08807 USA

来源：

MICROMACHINES | 2024年 / 15卷 / 09期

关键词：

D O I：

10.3390/mi15091092

中图分类号：

O65 [分析化学];

学科分类号：

070302 ; 081704 ;

摘要：

引用

页数：3

共 12 条

[1] Structural biology in situ - the potential of subtomogram averaging [J].

Briggs, John A. G. .

CURRENT OPINION IN STRUCTURAL BIOLOGY, 2013, 23 (02) :261-267

[2] Electron microscopy holdings of the Protein Data Bank: the impact of the resolution revolution, new validation tools, and implications for the future [J].

Burley, Stephen K. ;

Berman, Helen M. ;

Chiu, Wah ;

Dai, Wei ;

Flatt, Justin W. ;

Hudson, Brian P. ;

Kaelber, Jason T. ;

Khare, Sagar D. ;

Kulczyk, Arkadiusz W. ;

Lawson, Catherine L. ;

Pintilie, Grigore D. ;

Sali, Andrej ;

Vallat, Brinda ;

Westbrook, John D. ;

Young, Jasmine Y. ;

Zardecki, Christine .

BIOPHYSICAL REVIEWS, 2022, 14 (06) :1281-1301

[3] Novel Artificial Intelligence-Based Approaches for Ab Initio Structure Determination and Atomic Model Building for Cryo-Electron Microscopy [J].

Diiorio, Megan C. ;

Kulczyk, Arkadiusz W. .

MICROMACHINES, 2023, 14 (09)

[4] Exploring the Structural Variability of Dynamic Biological Complexes by Single-Particle Cryo-Electron Microscopy [J].

DiIorio, Megan C. C. ;

Kulczyk, Arkadiusz W. W. .

MICROMACHINES, 2023, 14 (01)

[5] Highly accurate protein structure prediction with AlphaFold [J].

Jumper, John ;

Evans, Richard ;

Pritzel, Alexander ;

Green, Tim ;

Figurnov, Michael ;

Ronneberger, Olaf ;

Tunyasuvunakool, Kathryn ;

Bates, Russ ;

Zidek, Augustin ;

Potapenko, Anna ;

Bridgland, Alex ;

Meyer, Clemens ;

Kohl, Simon A. A. ;

Ballard, Andrew J. ;

Cowie, Andrew ;

Romera-Paredes, Bernardino ;

Nikolov, Stanislav ;

Jain, Rishub ;

Adler, Jonas ;

Back, Trevor ;

Petersen, Stig ;

Reiman, David ;

Clancy, Ellen ;

Zielinski, Michal ;

Steinegger, Martin ;

Pacholska, Michalina ;

Berghammer, Tamas ;

Bodenstein, Sebastian ;

Silver, David ;

Vinyals, Oriol ;

Senior, Andrew W. ;

Kavukcuoglu, Koray ;

Kohli, Pushmeet ;

Hassabis, Demis .

NATURE, 2021, 596 (7873) :583-+

[6] Delineating Conformational Variability in Small Protein Structures Using Combinatorial Refinement Strategies [J].

Kelly, Deborah F. ;

Jonaid, G. M. ;

Kaylor, Liam ;

Solares, Maria J. ;

Berry, Samantha ;

DiCecco, Liza-Anastasia ;

Dearnaley, William ;

Casasanta, Michael .

MICROMACHINES, 2023, 14 (10)

[7] Advanced cryo-tomography workflow developments - correlative microscopy, milling automation and cryo-lift-out [J].

Kuba, Jakub ;

Mitchels, John ;

Hovorka, Milos ;

Erdmann, Philipp ;

Berka, Lukas ;

Kirmse, Robert ;

Koenig, Julia ;

De Bock, Jan ;

Goetze, Bernhard ;

Rigort, Alexander .

JOURNAL OF MICROSCOPY, 2021, 281 (02) :112-124

[8] Artificial intelligence and the analysis of cryo-EM data provide structural insight into the molecular mechanisms underlying LN-lamininopathies [J].

Kulczyk, Arkadiusz W. .

SCIENTIFIC REPORTS, 2023, 13 (01)

[9] Cryo-EM reveals the molecular basis of laminin polymerization and LN-lamininopathies [J].

Kulczyk, Arkadiusz W. ;

McKee, Karen K. ;

Zhang, Ximo ;

Bizukojc, Iwona ;

Yu, Ying Q. ;

Yurchenco, Peter D. .

NATURE COMMUNICATIONS, 2023, 14 (01)

[10] Cryo-EM structure of Shiga toxin 2 in complex with the native ribosomal P-stalk reveals residues involved in the binding interaction [J].

Kulczyk, Arkadiusz W. ;

Sorzano, Carlos Oscar S. ;

Grela, Przemyslaw ;

Tchorzewski, Marek ;

Tumer, Nilgun E. ;

Li, Xiao-Ping .

JOURNAL OF BIOLOGICAL CHEMISTRY, 2023, 299 (01)

← 1 2 →