Recurrent attention U-Net for segmentation and quantification of breast arterial calcifications on synthesized 2D mammograms

被引:0
作者
AlJabri M. [1 ,2 ]
Alghamdi M. [1 ]
Collado-Mesa F. [3 ]
Abdel-Mottaleb M. [4 ]
机构
[1] Department of Computer Science and Artificial Intelligence, Umm Al-Qura University, Makkah, Makkah
[2] King Abdul Aziz University, Jeddah, Makkah
[3] Department of Radiology, Miller School of Medicine, University of Miami, Miami, Florida
[4] Department of Electrical and Computer Engineering, University of Miami, Miami, Florida
关键词
Cardiovascular; Deep-learning; Mammogram; Quantification; Segmentation; U-Net;
D O I
10.7717/PEERJ-CS.2076
中图分类号
学科分类号
摘要
Breast arterial calcifications (BAC) are a type of calcification commonly observed on mammograms and are generally considered benign and not associated with breast cancer. However, there is accumulating observational evidence of an association between BAC and cardiovascular disease, the leading cause of death in women. We present a deep learning method that could assist radiologists in detecting and quantifying BAC in synthesized 2D mammograms. We present a recurrent attention U-Net model consisting of encoder and decoder modules that include multiple blocks that each use a recurrent mechanism, a recurrent mechanism, and an attention module between them. The model also includes a skip connection between the encoder and the decoder, similar to a U-shaped network. The attention module was used to enhance the capture of long-range dependencies and enable the network to effectively classify BAC from the background, whereas the recurrent blocks ensured better feature representation. The model was evaluated using a dataset containing 2,000 synthesized 2D mammogram images. We obtained 99.8861% overall accuracy, 69.6107% sensitivity, 66.5758% F-1 score, and 59.5498% Jaccard coefficient, respectively. The presented model achieved promising performance compared with related models. © Copyright 2024 AlJabri et al.
引用
收藏
页码:1 / 26
页数:25
相关论文
共 42 条
[1]  
AlGhamdi M, Abdel-Mottaleb M, Collado-Mesa F., DU-Net: convolutional network for the detection of arterial calcifications in mammograms, IEEE Transactions on Medical Imaging, 39, 10, pp. 3240-3249, (2020)
[2]  
Aljabri M, AlGhamdi M., A review on the use of deep learning for medical images segmentation, Neurocomputing, 506, 4, pp. 311-335, (2022)
[3]  
Alom MZ, Yakopcic C, Taha TM, Asari VK., Nuclei segmentation with recurrent residual convolutional neural networks based U-Net (R2U-Net), NAECON 2018-IEEE National Aerospace and Electronics Conference, pp. 228-233, (2018)
[4]  
Chadashvili T, Litmanovich D, Hall F, Slanetz PJ., Do breast arterial calcifications on mammography predict elevated risk of coronary artery disease?, European Journal of Radiology, 85, 6, pp. 1121-1124, (2016)
[5]  
Chen L, Bentley P, Mori K, Misawa K, Fujiwara M, Rueckert D., DRINet for medical image segmentation, IEEE Transactions on Medical Imaging, 37, 11, pp. 2453-2462, (2018)
[6]  
Chen H, Qin Z, Ding Y, Tian L, Qin Z., Brain tumor segmentation with deep convolutional symmetric neural network, Neurocomputing, 392, 6, pp. 305-313, (2020)
[7]  
Cheng J-Z, Chen C-M, Cole EB, Pisano ED, Shen D., Automated delineation of calcified vessels in mammography by tracking with uncertainty and graphical linking techniques, IEEE Transactions on Medical Imaging, 31, 11, pp. 2143-2155, (2012)
[8]  
Cheng J-Z, Chen C-M, Shen D., Identification of breast vascular calcium deposition in digital mammography by linear structure analysis, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI), pp. 126-129, (2012)
[9]  
Cheng J-Z, Cole EB, Pisano ED, Shen D., Detection of arterial calcification in mammograms by random walks, International Conference on Information Processing in Medical Imaging, pp. 713-724, (2009)
[10]  
Conant EF, Beaber EF, Sprague BL, Herschorn SD, Weaver DL, Onega T, Tosteson ANA, McCarthy AM, Poplack SP, Haas JS, Armstrong K, Schnall MD, Barlow WE., Breast cancer screening using tomosynthesis in combination with digital mammography compared to digital mammography alone: a cohort study within the PROSPR consortium, Breast Cancer Research and Treatment, 156, 1, pp. 109-116, (2016)