Projection subspace clustering

被引:6
作者
Chen X. [1 ]
Liao M. [1 ]
Ye X. [2 ]
机构
[1] College of Mathematics and Computer Science, Fuzhou University, Fuzhou
[2] College of Economic and Management, Fuzhou University, Fuzhou
来源
Ye, Xianbao (yexb5626@163.com) | 1600年 / SAGE Publications Inc.卷 / 11期
基金
中国国家自然科学基金;
关键词
Gene expression data; Least-square regression; Low-rank representation; Projection; Sparse; Subspace clustering;
D O I
10.1177/1748301817707321
中图分类号
学科分类号
摘要
Gene expression data is a kind of high dimension and small sample size data. The clustering accuracy of conventional clustering techniques is lower on gene expression data due to its high dimension. Because some subspace segmentation approaches can be better applied in the high-dimensional space, three new subspace clustering models for gene expression data sets are proposed in this work. The proposed projection subspace clustering models have projection sparse subspace clustering, projection low-rank representation subspace clustering and projection least-squares regression subspace clustering which combine projection technique with sparse subspace clustering, low-rank representation and least-square regression, respectively. In order to compute the inner product in the high-dimensional space, the kernel function is used to the projection subspace clustering models. The experimental results on six gene expression data sets show these models are effective. © The Author(s) 2017.
引用
收藏
页码:224 / 233
页数:9
相关论文
共 25 条
  • [1] Zheng C.H., Zhang L., Ng T.Y., Et al., Metasample-based sparse representation for tumor classification, IEEE/ACM Trans Comput Biol Bioinform, 8, pp. 1273-1282, (2011)
  • [2] Gao Y., Church G., Improving molecular cancer class discovery through sparse non-negative matrix factorization, Bioinformatics, 21, pp. 3970-3975, (2005)
  • [3] Chen X., Jian C., Gene expression data clustering based on graph regularized subspace segmentation, Neurocomputing, 143, pp. 44-50, (2014)
  • [4] Huang J.Z., Ng M.K., Rong H., Et al., Automated variable weighting in k-means type clustering, IEEE Trans Pattern Anal Mach Intell, 27, pp. 657-668, (2005)
  • [5] Aggarwal C.C., Wolf J.L., Yu P.S., Et al., Fast algorithms for projected clustering, ACM SIGMOD Record. ACM, 28, pp. 61-72, (1999)
  • [6] Wold S., Esbensen K., Geladi P., Principal component analysis, Chemometr Intell Lab Syst, 2, pp. 37-52, (1987)
  • [7] Boult T.E., Brown L.G., Factorization-based segmentation of motions, Proceedings of the IEEE Workshop on Visual Motion, pp. 179-186, (1991)
  • [8] Vidal R., A tutorial on subspace clustering, IEEE Signal Process Mag, 28, pp. 52-68, (2010)
  • [9] Elhamifar E., Vidal R., Sparse Subspace Clustering. Computer Vision and Pattern Recognition, 2009, pp. 2790-2797, (2009)
  • [10] Liu G., Lin Z., Yu Y., Robust subspace segmentation by low-rank representation, Proceedings of the 27Th International Conference on Machine Learning (ICML-10) 2010, pp. 663-670, (2010)