Reliable deep learning in anomalous diffusion against out-of-distribution dynamics

被引:1
|
作者
Feng, Xiaochen [1 ]
Sha, Hao [1 ]
Zhang, Yongbing [1 ]
Su, Yaoquan [2 ]
Liu, Shuai [2 ]
Jiang, Yuan [1 ]
Hou, Shangguo [3 ]
Han, Sanyang [2 ]
Ji, Xiangyang [4 ]
机构
[1] Harbin Inst Technol Shenzhen, Sch Comp Sci & Technol, Shenzhen, Peoples R China
[2] Tsinghua Univ, Shenzhen Int Grad Sch, Shenzhen, Peoples R China
[3] Inst Syst & Phys Biol, Shenzhen Bay Lab, Shenzhen, Peoples R China
[4] Tsinghua Univ, Dept Automat, Beijing, Peoples R China
来源
NATURE COMPUTATIONAL SCIENCE | 2024年 / 4卷 / 10期
基金
中国国家自然科学基金;
关键词
MODELS;
D O I
10.1038/s43588-024-00703-7
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Anomalous diffusion plays a crucial rule in understanding molecular-level dynamics by offering valuable insights into molecular interactions, mobility states and the physical properties of systems across both biological and materials sciences. Deep-learning techniques have recently outperformed conventional statistical methods in anomalous diffusion recognition. However, deep-learning networks are typically trained by data with limited distribution, which inevitably fail to recognize unknown diffusion models and misinterpret dynamics when confronted with out-of-distribution (OOD) scenarios. In this work, we present a general framework for evaluating deep-learning-based OOD dynamics-detection methods. We further develop a baseline approach that achieves robust OOD dynamics detection as well as accurate recognition of in-distribution anomalous diffusion. We demonstrate that this method enables a reliable characterization of complex behaviors across a wide range of experimentally diverse systems, including nicotinic acetylcholine receptors in membranes, fluorescent beads in dextran solutions and silver nanoparticles undergoing active endocytosis. This work introduces a framework that enhances deep learning for anomalous diffusion, enabling reliable detection of out-of-distribution dynamics and characterization of complex behaviors across diverse systems.
引用
收藏
页码:761 / 772
页数:15
相关论文
共 50 条
  • [1] Reliable deep learning in anomalous diffusion against out-of-distribution dynamics
    Feng, Xiaochen
    Sha, Hao
    Zhang, Yongbing
    Su, Yaoquan
    Liu, Shuai
    Jiang, Yuan
    Hou, Shangguo
    Han, Sanyang
    Ji, Xiangyang
    NATURE COMPUTATIONAL SCIENCE, 2024, 4 (11): : 877 - 877
  • [2] Deep Stable Learning for Out-Of-Distribution Generalization
    Zhang, Xingxuan
    Cui, Peng
    Xu, Renzhe
    Zhou, Linjun
    He, Yue
    Shen, Zheyan
    2021 IEEE/CVF CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION, CVPR 2021, 2021, : 5368 - 5378
  • [3] Out-of-distribution generalization for learning quantum dynamics
    Caro, Matthias C.
    Huang, Hsin-Yuan
    Ezzell, Nicholas
    Gibbs, Joe
    Sornborger, Andrew T.
    Cincio, Lukasz
    Coles, Patrick J.
    Holmes, Zoe
    NATURE COMMUNICATIONS, 2023, 14 (01)
  • [4] Out-of-distribution generalization for learning quantum dynamics
    Matthias C. Caro
    Hsin-Yuan Huang
    Nicholas Ezzell
    Joe Gibbs
    Andrew T. Sornborger
    Lukasz Cincio
    Patrick J. Coles
    Zoë Holmes
    Nature Communications, 14
  • [5] Verifying the Generalization of Deep Learning to Out-of-Distribution Domains
    Amir, Guy
    Maayan, Osher
    Zelazny, Tom
    Katz, Guy
    Schapira, Michael
    JOURNAL OF AUTOMATED REASONING, 2024, 68 (03)
  • [6] Out-of-distribution Detection Learning with Unreliable Out-of-distribution Sources
    Zheng, Haotian
    Wang, Qizhou
    Fang, Zhen
    Xia, Xiaobo
    Liu, Feng
    Liu, Tongliang
    Han, Bo
    ADVANCES IN NEURAL INFORMATION PROCESSING SYSTEMS 36 (NEURIPS 2023), 2023,
  • [7] Machine and deep learning performance in out-of-distribution regressions
    Shmuel, Assaf
    Glickman, Oren
    Lazebnik, Teddy
    Machine Learning: Science and Technology, 2024, 5 (04):
  • [8] Continual Evidential Deep Learning for Out-of-Distribution Detection
    Aguilar, Eduardo
    Raducanu, Bogdan
    Radeva, Petia
    De Weijer, Joost Van
    2023 IEEE/CVF INTERNATIONAL CONFERENCE ON COMPUTER VISION WORKSHOPS, ICCVW, 2023, : 3436 - 3446
  • [9] Deep Individual Active Learning: Safeguarding against Out-of-Distribution Challenges in Neural Networks
    Shayovitz, Shachar
    Bibas, Koby
    Feder, Meir
    ENTROPY, 2024, 26 (02)
  • [10] Deep Feature Deblurring Diffusion for Detecting Out-of-Distribution Objects
    Wu, Aming
    Chen, Da
    Deng, Cheng
    2023 IEEE/CVF INTERNATIONAL CONFERENCE ON COMPUTER VISION (ICCV 2023), 2023, : 13335 - 13345