Sequence design-based control of DNA droplets formed from phase separation of DNA nanostructures

被引:0
|
作者
Sato, Yusuke [1 ]
Sakamoto, Tetsuro [1 ]
Takinoue, Masahiro [1 ]
机构
[1] Department of Computer Science, Tokyo Institute of Technology, Kanagawa,226-8502, Japan
来源
arXiv | 2019年
关键词
Engineering Village;
D O I
暂无
中图分类号
学科分类号
摘要
Base sequences - DNA nanostructures - Dynamic behaviors - Enzymatic reaction - Fusion-Fission - Liquid-liquid phase separation - Macromolecular structures - Phase-separation temperature - Separation systems - Sequence designs
引用
收藏
相关论文
共 50 条
  • [1] Capsule-like DNA Hydrogels with Patterns Formed by Lateral Phase Separation of DNA Nanostructures
    Sato, Yusuke
    Takinoue, Masahiro
    JACS AU, 2022, 2 (01): : 159 - 168
  • [2] DNA droplets: self-assembly and phase transition of DNA nanostructures
    Sato, Y.
    Sakamoto, T.
    Takinoue, M.
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2019, 48 : S211 - S211
  • [3] Computational DNA Droplets Recognizing miRNA Sequence Inputs Based on Liquid-Liquid Phase Separation
    Gong, Jing
    Tsumura, Nozomi
    Sato, Yusuke
    Takinoue, Masahiro
    ADVANCED FUNCTIONAL MATERIALS, 2022, 32 (37)
  • [4] Sequence-dependent DNA condensation as a driving force of DNA phase separation
    Kang, Hyunju
    Yoo, Jejoong
    Sohn, Byeong-Kwon
    Lee, Seung-Won
    Lee, Hong Soo
    Ma, Wenjie
    Kee, Jung-Min
    Aksimentiev, Aleksei
    Kim, Hajin
    NUCLEIC ACIDS RESEARCH, 2018, 46 (18) : 9401 - 9413
  • [5] Chemical control of phase separation in DNA solutions
    Hauf, Samuel
    Yokobayashi, Yohei
    CHEMICAL COMMUNICATIONS, 2023, 59 (25) : 3751 - 3754
  • [6] DNA sequence design based on template strategy
    Liu, WB
    Wang, SD
    Gao, L
    Zhang, FY
    Xu, J
    JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2003, 43 (06): : 2014 - 2018
  • [7] Phase separation of DNA: From past to present
    King, John T.
    Shakya, Anisha
    BIOPHYSICAL JOURNAL, 2021, 120 (07) : 1139 - 1149
  • [8] Recovery of intact DNA nanostructures after agarose gel–based separation
    Gaëtan Bellot
    Mark A McClintock
    Chenxiang Lin
    William M Shih
    Nature Methods, 2011, 8 : 192 - 194
  • [9] A Dynamic Control Center Based on a DNA Reaction Network for Programmable Building of DNA Nanostructures
    Chen, Fengming
    Wang, Dan
    He, Lei
    Liu, Yihao
    Du, Yulin
    Guo, Zhenzhen
    He, Shuoyao
    Wang, Zhimin
    Zhang, Jing
    Lyu, Yifan
    Tan, Weihong
    ACS NANO, 2023, 17 (07) : 6615 - 6626
  • [10] DNA SEQUENCE DESIGN FOR DNA COMPUTATION BASED ON BINARY PARTICLE SWARM OPTIMIZATION
    Ibrahim, Zuwairie
    Khalid, Noor Khafifah
    Buyamin, Salinda
    Ibrahim, Ismail
    Mukred, Jameel Abdulla Ahmed
    Yusof, Zulkifli Md.
    Mohamad, Mohd Saberi
    Mokhtar, N.
    Saaid, Muhammad Faiz Mohamed
    Engelbrecht, Andries
    INTERNATIONAL JOURNAL OF INNOVATIVE COMPUTING INFORMATION AND CONTROL, 2012, 8 (5B): : 3441 - 3450