In this paper, we introduce a variation of the group testing problem capturing the idea that a positive test requires a combination of multiple "types" of items. Specifically, we assume that there are multiple disjoint semi-defective sets, and a test is positive if and only if it contains at least one item from each of these sets. The goal is to reliably identify all of the semi-defective sets using as few tests as possible, and we refer to this problem as Concomitant Group Testing (ConcGT). We derive a variety of algorithms for this task, focusing primarily on the case that there are two semi-defective sets. Our algorithms are distinguished by (i) whether they are deterministic (zero-error) or randomized (small-error), and (ii) whether they are non-adaptive, fully adaptive, or have limited adaptivity (namely, 2 or 3 stages). Both our deterministic adaptive algorithm and our randomized algorithms (non-adaptive or limited adaptivity) are order-optimal in broad scaling regimes of interest, and improve significantly over baseline results that are based on solving a more general problem as an intermediate step (e.g., hypergraph learning).
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Univ Calif San Diego, Dept Elect & Comp Engn ECE, San Diego, CA 92093 USA
Univ Calif Berkeley, Dept Elect Engn & Comp Sci EECS, Berkeley, CA 94720 USAUniv Calif San Diego, Dept Elect & Comp Engn ECE, San Diego, CA 92093 USA
Wang, Hsin-Po
Gabrys, Ryan
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Univ Calif San Diego, Dept Elect & Comp Engn ECE, San Diego, CA 92093 USA
Univ Calif San Diego, Naval Informat Warfare Ctr San Diego, San Diego, CA 92093 USAUniv Calif San Diego, Dept Elect & Comp Engn ECE, San Diego, CA 92093 USA
Gabrys, Ryan
Vardy, Alexander
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Univ Calif San Diego, Dept Elect & Comp Engn ECE, San Diego, CA 92093 USAUniv Calif San Diego, Dept Elect & Comp Engn ECE, San Diego, CA 92093 USA