Peak detection algorithm of Raman spectra based on multi-scale local signal-to-noise ratio

被引:0
|
作者
机构
[1] Opto-Electricity Technology Research Center, Changchun Institute of Optics, Fine Mechanics and Physics, Chinese Academy of Sciences, Changchun
[2] State Key Laboratory of Applied Optics, Changchun Institute of Optics, Fine Mechanics and Physics, Chinese Academy of Sciences, Changchun
[3] University of Chinese Academy of Sciences
来源
Sun, Q. (sunq@ciomp.ac.cn) | 1600年 / Chinese Optical Society卷 / 34期
关键词
Continuous wavelet transform; Multi-scale local signal-to-noise ratio; Raman spectrum; Spectral peak recognition; Spectroscopy;
D O I
10.3788/AOS201434.0630001
中图分类号
学科分类号
摘要
Raman spectral peak recognition is one of the key technologies in qualitative analysis of Raman spectra. Due to the defects of low degree of automation and low recognition accuracy of the existing Raman spectral recognition methods, a new Raman peak recognition algorithm based on multi-scale local signal-to-noise ratio (MLSNR) is proposed. The algorithm gets the multi-scale second order difference coefficient of spectrum through multi-scale second order difference operation, then divides the multi-scale second order difference coefficient by the estimated noise standard deviation to obtain the MLSNR matrix of spectrum, and identifies Raman peaks by searching the ridges caused by local maxima in MLSNR matrix. The algorithm uses an automatic threshold estimation method to avoid the interference of local maximum caused by noise, and can recognize Raman peaks automatically without any parameter to be specified by human. The simulation result shows that no matter to singular peak or congested peaks, when the signal-to-noise ratio of Raman peak is greater than or equal to 6, the recognition accuracy of MLSNR algorithm is 100%, even to the singular peak at the detection limit, the recognition accuracy is more than 95%. MLSNR algorithm is a practical Raman spectral peak identification method.
引用
收藏
相关论文
共 15 条
  • [1] An Y., Liu Y., Sun Q., Et al., Design and development of optical system for portable Raman spectrometer, Acta Optica Sinica, 33, 3, (2013)
  • [2] Niu L., Lin M., Li X., Et al., Raman spectroscopic analysis of single white blood cell of DM mouse in vivo, Laser & Optoelectronics Progress, 49, 6, (2012)
  • [3] Ye Y., Chen Y., Li Y., Et al., Discrimination of nasopharyngeal carcinoma and normal nasopharyngeal cell lines based on confocal Raman microspectroscopy, Chinese J Lasers, 39, 5, (2012)
  • [4] Reich G., Recognizing chromatographic peaks with pattern recognition methods: Part 1. development of a k-nearest-neighbour technique, Analytica Chimica Acta, 201, pp. 153-170, (1987)
  • [5] Reich G., Recognizing chromatographic peaks with pattern recognition methods III. Application of the algorithm for peak recognition in trace analysis, Chromatographia, 24, 1, pp. 659-665, (1987)
  • [6] Watzig H., Peak recognition technique by a computer program copying the human judgement, Chromatographia, 33, 5-6, pp. 218-224, (1992)
  • [7] Du P., Kibbe W.A., Lin S.M., Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching, Bioinformatics, 22, 17, pp. 2059-2065, (2006)
  • [8] Wee A., Grayden D.B., Zhu Y., Et al., A continuous wavelet transform algorithm for peak detection, Electrophoresis, 29, 20, pp. 4215-4225, (2008)
  • [9] Cai Z., Wu J., An automatic peak detection algorithm for Raman spectroscopy based on wavelet transform, SPIE, 8200, (2011)
  • [10] Cooper G., Kubik M., Kubik K., Wavelet based Raman spectra comparison, Chemometrics and Intelligent Laboratory Systems, 107, 1, pp. 65-68, (2011)