Nanobody inhibitors of Plexin-B1 identify allostery in plexin-semaphorin interactions and signaling

被引：3

作者：

Cowan, Richard ^{[1
]}

Trokter, Martina ^{[2
]}

Oleksy, Arkadiusz ^{[2
]}

Fedorova, Marina ^{[2
]}

Sawmynaden, Kovilen ^{[2
]}

Worzfeld, Thomas ^{[3
,4
]}

Offermanns, Stefan ^{[4
]}

Matthews, David ^{[2
]}

Carr, Mark D. ^{[1
]}

Hall, Gareth ^{[1
]}

机构：

[1] Univ Leicester, Leicester Inst Struct & Chem Biol, Dept Mol & Cell Biol, Leicester, England

[2] LifeArc, Ctr Therapeut Discovery, Stevenage, England

[3] Univ Marburg, Inst Pharmacol, Marburg, Germany

[4] Max Planck Inst Heart & Lung Res, Dept Pharmacol, Bad Nauheim, Germany

来源：

JOURNAL OF BIOLOGICAL CHEMISTRY | 2023年 / 299卷 / 06期

关键词：

STRUCTURAL BASIS; RHO; ACTIVATION; RECEPTORS; MIGRATION; FEATURES; BINDING; ASSAY; RND1;

D O I：

10.1016/j.jbc.2023.104740

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Plexin-B1 is a receptor for the cell surface semaphorin, Sema4D. This signaling system has been implicated in a variety of human diseases, including cancer, multiple sclerosis and osteoporosis. While inhibitors of the Plexin-B1:Sema4D interaction have been previously reported, understanding their mechanism has been hindered by an incomplete structural view of Plexin-B1. In this study, we have raised and characterized a pair of nanobodies that are specific for mouse Plexin-B1 and which inhibit the binding of Sema4D to mouse Plexin-B1 and its biological activity. Structural studies of these nanobodies reveal that they inhibit the binding of Sema4D in an allosteric manner, binding to epitopes not previously reported. In addition, we report the first unbound structure of human Plexin-B1, which reveals that Plexin-B1 undergoes a conformational change on Sema4D binding. These changes mirror those seen upon binding of allosteric peptide modulators, which suggests a new model for understanding Plexin-B1 signaling and provides a potential innovative route for therapeutic modulation of Plexin-B1.

引用

页数：16

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