Near-pair patch generative adversarial network for data augmentation of focal pathology object detection models

被引:0
作者
Tu, Ethan [1 ]
Burkow, Jonathan [1 ]
Tsai, Andy [2 ]
Junewick, Joseph [3 ,4 ]
Perez, Francisco A. [5 ]
Otjen, Jeffrey [5 ]
Alessio, Adam M. [1 ]
机构
[1] Michigan State Univ, Med Imaging & Data Integrat Lab, Dept Biomed Engn, E Lansing, MI 48824 USA
[2] Harvard Med Sch, Boston Childrens Hosp, Boston, MA USA
[3] Helen DeVos Childrens Hosp, Adv Radiol Serv, Grand Rapids, MI USA
[4] Michigan State Univ, Div Radiol & Biomed Imaging, Grand Rapids, MI USA
[5] Univ Washington, Seattle Childrens Hosp, Seattle, WA USA
基金
美国国家卫生研究院;
关键词
data augmentation; pediatric rib fracture; rib fracture detection; generative adversarial networks;
D O I
10.1117/1.JMI.11.3.034505
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Purpose: The limited volume of medical training data remains one of the leading challenges for machine learning for diagnostic applications. Object detectors that identify and localize pathologies require training with a large volume of labeled images, which are often expensive and time-consuming to curate. To reduce this challenge, we present a method to support distant supervision of object detectors through generation of synthetic pathology-present labeled images. Approach: Our method employs the previously proposed cyclic generative adversarial network (cycleGAN) with two key innovations: (1) use of "near-pair" pathology-present regions and pathology-absent regions from similar locations in the same subject for training and (2) the addition of a realism metric (Frechet inception distance) to the generator loss term. We trained and tested this method with 2800 fracture-present and 2800 fracture-absent image patches from 704 unique pediatric chest radiographs. The trained model was then used to generate synthetic pathology-present images with exact knowledge of location (labels) of the pathology. These synthetic images provided an augmented training set for an object detector. Results: In an observer study, four pediatric radiologists used a five-point Likert scale indicating the likelihood of a real fracture (1 = definitely not a fracture and 5 = definitely a fracture) to grade a set of real fracture-absent, real fracture-present, and synthetic fracture-present images. The real fracture-absent images scored 1.71.0, real fracture-present images 4.1 +/- 1.2, and synthetic fracture-present images 2.5 +/- 1.2. An object detector model (YOLOv5) trained on a mix of 500 real and 500 synthetic radiographs performed with a recall of 0.57 +/- 0.05 and an F2 score of 0.59 +/- 0.05. In comparison, when trained on only 500 real radiographs, the recall and F2 score were 0.49 +/- 0.06 and 0.53 +/- 0.06, respectively. Conclusions: Our proposed method generates visually realistic pathology and that provided improved object detector performance for the task of rib fracture detection. (c) 2024 Society of Photo-Optical Instrumentation Engineers (SPIE)
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页数:13
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