Accurate and Fast Prediction of Intrinsically Disordered Protein by Multiple Protein Language Models and Ensemble Learning

被引:0
|
作者
Xu, Shijie [1 ]
Onoda, Akira [1 ,2 ]
机构
[1] Graduate School of Environmental Science, Hokkaido University, Sapporo,060-0810, Japan
[2] Faculty of Environmental Earth Science, Hokkaido University, Sapporo,060-0810, Japan
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Proteins
引用
收藏
页码:2901 / 2911
相关论文
共 50 条
  • [1] Accurate and Fast Prediction of Intrinsically Disordered Protein by Multiple Protein Language Models and Ensemble Learning
    Xu, Shijie
    Onoda, Akira
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2023, 64 (07) : 2901 - 2911
  • [2] The conformational ensemble of an intrinsically disordered protein
    Petridis, Loukas
    FASEB JOURNAL, 2019, 33
  • [3] NetSurfP-3.0: accurate and fast prediction of protein structural features by protein language models and deep learning
    Hoie, Magnus Haraldson
    Kiehl, Erik Nicolas
    Petersen, Bent
    Nielsen, Morten
    Winther, Ole
    Nielsen, Henrik
    Hallgren, Jeppe
    Marcatili, Paolo
    NUCLEIC ACIDS RESEARCH, 2022, 50 (W1) : W510 - W515
  • [4] Generation of the Configurational Ensemble of an Intrinsically Disordered Protein
    Petridis, Loukas
    FASEB JOURNAL, 2020, 34
  • [5] Protein Fitness Prediction Is Impacted by the Interplay of Language Models, Ensemble Learning, and Sampling Methods
    Mardikoraem, Mehrsa
    Woldring, Daniel
    PHARMACEUTICS, 2023, 15 (05)
  • [6] Thermodynamic Models for Assembly of Intrinsically Disordered Protein Hubs with Multiple Interaction Partners
    Cho, ByeongJin
    Choi, Jaejun
    Kim, RyeongHyeon
    Yun, Jean Nyoung
    Choi, Yuri
    Lee, Hyung Ho
    Koh, Junseock
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2021, 143 (32) : 12509 - 12523
  • [7] Prediction of protein-protein interaction sites in intrinsically disordered proteins
    Chen, Ranran
    Li, Xinlu
    Yang, Yaqing
    Song, Xixi
    Wang, Cheng
    Qiao, Dongdong
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 9
  • [8] Intrinsically disordered protein
    Dunker, AK
    Lawson, JD
    Brown, CJ
    Williams, RM
    Romero, P
    Oh, JS
    Oldfield, CJ
    Campen, AM
    Ratliff, CR
    Hipps, KW
    Ausio, J
    Nissen, MS
    Reeves, R
    Kang, CH
    Kissinger, CR
    Bailey, RW
    Griswold, MD
    Chiu, M
    Garner, EC
    Obradovic, Z
    JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 2001, 19 (01): : 26 - 59
  • [9] Expert-guided protein language models enable accurate and blazingly fast fitness prediction
    Marquet, Celine
    Schlensok, Julius
    Abakarova, Marina
    Rost, Burkhard
    Laine, Elodie
    BIOINFORMATICS, 2024, 40 (11)
  • [10] Intrinsically Disordered Proteins and Intrinsically Disordered Protein Regions
    Oldfield, Christopher J.
    Dunker, A. Keith
    ANNUAL REVIEW OF BIOCHEMISTRY, VOL 83, 2014, 83 : 553 - 584